Gene : Phvul.007G091500 P. vulgaris v2.1
Defline:  (1 of 1) K02435 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C (gatC, GATC) Genomic Order:  925
Name:  ? Phvul.007G091500 Secondary Identifier:  ? PAC:37166586
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G091500 0.5kb upstream 0.5kb upstream 3531 true Chr07: 9508499-9512029 Phaseolus vulgaris
Phvul.007G091500 0.5kb upstream 0.5kb upstream 500 false Chr07: 9511530-9512029 Phaseolus vulgaris
Phvul.007G091500 0.5kb downstream 0.5kb downstream 3531 true Chr07: 9507999-9511529 Phaseolus vulgaris
Phvul.007G091500 0.5kb downstream 0.5kb downstream 500 false Chr07: 9507999-9508498 Phaseolus vulgaris
Phvul.007G091500 1.0kb upstream 1.0kb upstream 4031 true Chr07: 9508499-9512529 Phaseolus vulgaris
Phvul.007G091500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9511530-9512529 Phaseolus vulgaris
Phvul.007G091500 1.0kb downstream 1.0kb downstream 4031 true Chr07: 9507499-9511529 Phaseolus vulgaris
Phvul.007G091500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9507499-9508498 Phaseolus vulgaris
Phvul.007G091500 2.0kb upstream 2.0kb upstream 5031 true Chr07: 9508499-9513529 Phaseolus vulgaris
Phvul.007G091500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9511530-9513529 Phaseolus vulgaris
Phvul.007G091500 2.0kb downstream 2.0kb downstream 5031 true Chr07: 9506499-9511529 Phaseolus vulgaris
Phvul.007G091500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9506499-9508498 Phaseolus vulgaris
Phvul.007G091500 5.0kb upstream 5.0kb upstream 8031 true Chr07: 9508499-9516529 Phaseolus vulgaris
Phvul.007G091500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9511530-9516529 Phaseolus vulgaris
Phvul.007G091500 5.0kb downstream 5.0kb downstream 8031 true Chr07: 9503499-9511529 Phaseolus vulgaris
Phvul.007G091500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9503499-9508498 Phaseolus vulgaris
Phvul.007G091500 10.0kb upstream 10.0kb upstream 13031 true Chr07: 9508499-9521529 Phaseolus vulgaris
Phvul.007G091500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9511530-9521529 Phaseolus vulgaris
Phvul.007G091500 10.0kb downstream 10.0kb downstream 13031 true Chr07: 9498499-9511529 Phaseolus vulgaris
Phvul.007G091500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9498499-9508498 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312033 5265 Fabidae View MSA
124065204 5270 Rosid View MSA
123741294 5271 Pentapetalae View MSA
122794718 5272 Eudicot View MSA
122044892 5273 Angiosperm View MSA
121344912 5274 Embryophyte View MSA
123380128 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7744 0.0 50.2735    
cufflinks 14.6363 0.0 42.3233    
cufflinks 39.5278 0.0 104.637 High High
cufflinks 22.5917 0.0 62.8502    
cufflinks 11.8792 0.0 35.3526    
cufflinks 20.155 0.0 56.47    
cufflinks 5.4779 0.0 17.6975   Low
cufflinks 9.4008 0.0 28.4589    
cufflinks 7.88818 0.0 24.5093    
cufflinks 9.68638 0.0 29.4427    
cufflinks 9.26612 0.0 28.348    

0 Strain