Gene : Phvul.004G145000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10766//PTHR10766:SF58 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1477
Name:  ? Phvul.004G145000 Secondary Identifier:  ? PAC:37162078
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G145000 0.5kb upstream 0.5kb upstream 4726 true Chr04: 44623064-44627789 Phaseolus vulgaris
Phvul.004G145000 0.5kb upstream 0.5kb upstream 500 false Chr04: 44627290-44627789 Phaseolus vulgaris
Phvul.004G145000 0.5kb downstream 0.5kb downstream 4726 true Chr04: 44622564-44627289 Phaseolus vulgaris
Phvul.004G145000 0.5kb downstream 0.5kb downstream 500 false Chr04: 44622564-44623063 Phaseolus vulgaris
Phvul.004G145000 1.0kb upstream 1.0kb upstream 5226 true Chr04: 44623064-44628289 Phaseolus vulgaris
Phvul.004G145000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44627290-44628289 Phaseolus vulgaris
Phvul.004G145000 1.0kb downstream 1.0kb downstream 5226 true Chr04: 44622064-44627289 Phaseolus vulgaris
Phvul.004G145000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44622064-44623063 Phaseolus vulgaris
Phvul.004G145000 2.0kb upstream 2.0kb upstream 6226 true Chr04: 44623064-44629289 Phaseolus vulgaris
Phvul.004G145000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44627290-44629289 Phaseolus vulgaris
Phvul.004G145000 2.0kb downstream 2.0kb downstream 6226 true Chr04: 44621064-44627289 Phaseolus vulgaris
Phvul.004G145000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44621064-44623063 Phaseolus vulgaris
Phvul.004G145000 5.0kb upstream 5.0kb upstream 9226 true Chr04: 44623064-44632289 Phaseolus vulgaris
Phvul.004G145000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44627290-44632289 Phaseolus vulgaris
Phvul.004G145000 5.0kb downstream 5.0kb downstream 9226 true Chr04: 44618064-44627289 Phaseolus vulgaris
Phvul.004G145000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44618064-44623063 Phaseolus vulgaris
Phvul.004G145000 10.0kb upstream 10.0kb upstream 14226 true Chr04: 44623064-44637289 Phaseolus vulgaris
Phvul.004G145000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44627290-44637289 Phaseolus vulgaris
Phvul.004G145000 10.0kb downstream 10.0kb downstream 14226 true Chr04: 44613064-44627289 Phaseolus vulgaris
Phvul.004G145000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44613064-44623063 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304016 5265 Fabidae View MSA
124069153 5270 Rosid View MSA
123738097 5271 Pentapetalae View MSA
122788164 5272 Eudicot View MSA
122049966 5273 Angiosperm View MSA
121347784 5274 Embryophyte View MSA
123425763 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.0174 0.0 147.316 High Low
cufflinks 83.2333 0.0 237.656 High  
cufflinks 58.9423 0.0 162.216 High Low
cufflinks 162.016 0.0 507.648 High High
cufflinks 142.717 0.0 438.976 High High
cufflinks 74.8557 0.0 211.059 High  
cufflinks 81.3323 0.0 231.516 High  
cufflinks 64.2609 0.0 178.034 High  
cufflinks 100.488 0.0 292.903 High  
cufflinks 89.0112 0.0 256.278 High  
cufflinks 180.102 0.0 576.453 High High

0 Strain