Gene : Phvul.007G090700 P. vulgaris v2.1
Defline:  (1 of 55) PF03514 - GRAS domain family (GRAS) Genomic Order:  917
Name:  ? Phvul.007G090700 Secondary Identifier:  ? PAC:37163989
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G090700 0.5kb upstream 0.5kb upstream 1886 true Chr07: 9358337-9360222 Phaseolus vulgaris
Phvul.007G090700 0.5kb upstream 0.5kb upstream 500 false Chr07: 9359723-9360222 Phaseolus vulgaris
Phvul.007G090700 0.5kb downstream 0.5kb downstream 1886 true Chr07: 9357837-9359722 Phaseolus vulgaris
Phvul.007G090700 0.5kb downstream 0.5kb downstream 500 false Chr07: 9357837-9358336 Phaseolus vulgaris
Phvul.007G090700 1.0kb upstream 1.0kb upstream 2386 true Chr07: 9358337-9360722 Phaseolus vulgaris
Phvul.007G090700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9359723-9360722 Phaseolus vulgaris
Phvul.007G090700 1.0kb downstream 1.0kb downstream 2386 true Chr07: 9357337-9359722 Phaseolus vulgaris
Phvul.007G090700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9357337-9358336 Phaseolus vulgaris
Phvul.007G090700 2.0kb upstream 2.0kb upstream 3386 true Chr07: 9358337-9361722 Phaseolus vulgaris
Phvul.007G090700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9359723-9361722 Phaseolus vulgaris
Phvul.007G090700 2.0kb downstream 2.0kb downstream 3386 true Chr07: 9356337-9359722 Phaseolus vulgaris
Phvul.007G090700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9356337-9358336 Phaseolus vulgaris
Phvul.007G090700 5.0kb upstream 5.0kb upstream 6386 true Chr07: 9358337-9364722 Phaseolus vulgaris
Phvul.007G090700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9359723-9364722 Phaseolus vulgaris
Phvul.007G090700 5.0kb downstream 5.0kb downstream 6386 true Chr07: 9353337-9359722 Phaseolus vulgaris
Phvul.007G090700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9353337-9358336 Phaseolus vulgaris
Phvul.007G090700 10.0kb upstream 10.0kb upstream 11386 true Chr07: 9358337-9369722 Phaseolus vulgaris
Phvul.007G090700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9359723-9369722 Phaseolus vulgaris
Phvul.007G090700 10.0kb downstream 10.0kb downstream 11386 true Chr07: 9348337-9359722 Phaseolus vulgaris
Phvul.007G090700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9348337-9358336 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303664 5265 Fabidae View MSA
124071598 5270 Rosid View MSA
123750317 5271 Pentapetalae View MSA
122794968 5272 Eudicot View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0261545 0.0 0.129622 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0435428 0.0 0.203376 Low  
cufflinks 0.200874 0.0 0.819743 Low  
cufflinks 0.26597 0.0 1.0598 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0416852 0.0 0.195678 Low  
cufflinks 0.123722 0.0 0.52316 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.286325 0.0 1.13237 Low High

0 Strain