Gene : Phvul.007G096000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10774:SF62 - SYNAPTOTAGMIN-3 Genomic Order:  970
Name:  ? Phvul.007G096000 Secondary Identifier:  ? PAC:37164586
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G096000 0.5kb upstream 0.5kb upstream 5471 true Chr07: 10206204-10211674 Phaseolus vulgaris
Phvul.007G096000 0.5kb upstream 0.5kb upstream 500 false Chr07: 10211175-10211674 Phaseolus vulgaris
Phvul.007G096000 0.5kb downstream 0.5kb downstream 5471 true Chr07: 10205704-10211174 Phaseolus vulgaris
Phvul.007G096000 0.5kb downstream 0.5kb downstream 500 false Chr07: 10205704-10206203 Phaseolus vulgaris
Phvul.007G096000 1.0kb upstream 1.0kb upstream 5971 true Chr07: 10206204-10212174 Phaseolus vulgaris
Phvul.007G096000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10211175-10212174 Phaseolus vulgaris
Phvul.007G096000 1.0kb downstream 1.0kb downstream 5971 true Chr07: 10205204-10211174 Phaseolus vulgaris
Phvul.007G096000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10205204-10206203 Phaseolus vulgaris
Phvul.007G096000 2.0kb upstream 2.0kb upstream 6971 true Chr07: 10206204-10213174 Phaseolus vulgaris
Phvul.007G096000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10211175-10213174 Phaseolus vulgaris
Phvul.007G096000 2.0kb downstream 2.0kb downstream 6971 true Chr07: 10204204-10211174 Phaseolus vulgaris
Phvul.007G096000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10204204-10206203 Phaseolus vulgaris
Phvul.007G096000 5.0kb upstream 5.0kb upstream 9971 true Chr07: 10206204-10216174 Phaseolus vulgaris
Phvul.007G096000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10211175-10216174 Phaseolus vulgaris
Phvul.007G096000 5.0kb downstream 5.0kb downstream 9971 true Chr07: 10201204-10211174 Phaseolus vulgaris
Phvul.007G096000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10201204-10206203 Phaseolus vulgaris
Phvul.007G096000 10.0kb upstream 10.0kb upstream 14971 true Chr07: 10206204-10221174 Phaseolus vulgaris
Phvul.007G096000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10211175-10221174 Phaseolus vulgaris
Phvul.007G096000 10.0kb downstream 10.0kb downstream 14971 true Chr07: 10196204-10211174 Phaseolus vulgaris
Phvul.007G096000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10196204-10206203 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308978 5265 Fabidae View MSA
124064081 5270 Rosid View MSA
123738784 5271 Pentapetalae View MSA
122793705 5272 Eudicot View MSA
122046741 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121310651 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.42324 0.0 4.62369    
cufflinks 0.993204 0.0 3.3671    
cufflinks 4.54632 0.0 12.9382   High
cufflinks 1.15813 0.0 3.90194    
cufflinks 0.769166 0.0 2.70781    
cufflinks 0.829416 0.0 2.86404    
cufflinks 2.02832 0.0 6.33085    
cufflinks 1.99904 0.0 6.21702    
cufflinks 1.17152 0.0 3.90169    
cufflinks 2.94321 0.0 8.84264   High
cufflinks 0.602184 0.0 2.16447   Low

0 Strain