Gene : Phvul.004G149301 P. vulgaris v2.1
Defline:  (1 of 466) PF13041 - PPR repeat family (PPR_2) Genomic Order:  1520
Name:  ? Phvul.004G149301 Secondary Identifier:  ? PAC:37163031
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G149301 0.5kb upstream 0.5kb upstream 2419 true Chr04: 45129212-45131630 Phaseolus vulgaris
Phvul.004G149301 0.5kb upstream 0.5kb upstream 500 false Chr04: 45131131-45131630 Phaseolus vulgaris
Phvul.004G149301 0.5kb downstream 0.5kb downstream 2419 true Chr04: 45128712-45131130 Phaseolus vulgaris
Phvul.004G149301 0.5kb downstream 0.5kb downstream 500 false Chr04: 45128712-45129211 Phaseolus vulgaris
Phvul.004G149301 1.0kb upstream 1.0kb upstream 2919 true Chr04: 45129212-45132130 Phaseolus vulgaris
Phvul.004G149301 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45131131-45132130 Phaseolus vulgaris
Phvul.004G149301 1.0kb downstream 1.0kb downstream 2919 true Chr04: 45128212-45131130 Phaseolus vulgaris
Phvul.004G149301 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45128212-45129211 Phaseolus vulgaris
Phvul.004G149301 2.0kb upstream 2.0kb upstream 3919 true Chr04: 45129212-45133130 Phaseolus vulgaris
Phvul.004G149301 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45131131-45133130 Phaseolus vulgaris
Phvul.004G149301 2.0kb downstream 2.0kb downstream 3919 true Chr04: 45127212-45131130 Phaseolus vulgaris
Phvul.004G149301 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45127212-45129211 Phaseolus vulgaris
Phvul.004G149301 5.0kb upstream 5.0kb upstream 6919 true Chr04: 45129212-45136130 Phaseolus vulgaris
Phvul.004G149301 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45131131-45136130 Phaseolus vulgaris
Phvul.004G149301 5.0kb downstream 5.0kb downstream 6919 true Chr04: 45124212-45131130 Phaseolus vulgaris
Phvul.004G149301 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45124212-45129211 Phaseolus vulgaris
Phvul.004G149301 10.0kb upstream 10.0kb upstream 11919 true Chr04: 45129212-45141130 Phaseolus vulgaris
Phvul.004G149301 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45131131-45141130 Phaseolus vulgaris
Phvul.004G149301 10.0kb downstream 10.0kb downstream 11919 true Chr04: 45119212-45131130 Phaseolus vulgaris
Phvul.004G149301 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45119212-45129211 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315297 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.217219 0.0 0.880151 Low Low
cufflinks 0.520356 0.0 1.97535    
cufflinks 0.51925 0.0 1.96609 Low  
cufflinks 0.446593 0.0 1.72617 Low  
cufflinks 0.420586 0.0 1.63076 Low  
cufflinks 0.980057 0.0 3.51987   High
cufflinks 0.333553 0.0 1.3114 Low  
cufflinks 0.365914 0.0 1.42208 Low  
cufflinks 0.287868 0.0 1.14767 Low Low
cufflinks 0.562275 0.0 2.12253    
cufflinks 0.504056 0.0 1.92863 Low  

0 Strain