Gene : Phvul.007G099000 P. vulgaris v2.1
Defline:  (1 of 2) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase Genomic Order:  1001
Name:  ? Phvul.007G099000 Secondary Identifier:  ? PAC:37164508
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4261 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6118 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G099000 0.5kb upstream 0.5kb upstream 6190 true Chr07: 10763725-10769914 Phaseolus vulgaris
Phvul.007G099000 0.5kb upstream 0.5kb upstream 500 false Chr07: 10769415-10769914 Phaseolus vulgaris
Phvul.007G099000 0.5kb downstream 0.5kb downstream 6190 true Chr07: 10763225-10769414 Phaseolus vulgaris
Phvul.007G099000 0.5kb downstream 0.5kb downstream 500 false Chr07: 10763225-10763724 Phaseolus vulgaris
Phvul.007G099000 1.0kb upstream 1.0kb upstream 6690 true Chr07: 10763725-10770414 Phaseolus vulgaris
Phvul.007G099000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10769415-10770414 Phaseolus vulgaris
Phvul.007G099000 1.0kb downstream 1.0kb downstream 6690 true Chr07: 10762725-10769414 Phaseolus vulgaris
Phvul.007G099000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10762725-10763724 Phaseolus vulgaris
Phvul.007G099000 2.0kb upstream 2.0kb upstream 7690 true Chr07: 10763725-10771414 Phaseolus vulgaris
Phvul.007G099000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10769415-10771414 Phaseolus vulgaris
Phvul.007G099000 2.0kb downstream 2.0kb downstream 7690 true Chr07: 10761725-10769414 Phaseolus vulgaris
Phvul.007G099000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10761725-10763724 Phaseolus vulgaris
Phvul.007G099000 5.0kb upstream 5.0kb upstream 10690 true Chr07: 10763725-10774414 Phaseolus vulgaris
Phvul.007G099000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10769415-10774414 Phaseolus vulgaris
Phvul.007G099000 5.0kb downstream 5.0kb downstream 10690 true Chr07: 10758725-10769414 Phaseolus vulgaris
Phvul.007G099000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10758725-10763724 Phaseolus vulgaris
Phvul.007G099000 10.0kb upstream 10.0kb upstream 15690 true Chr07: 10763725-10779414 Phaseolus vulgaris
Phvul.007G099000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10769415-10779414 Phaseolus vulgaris
Phvul.007G099000 10.0kb downstream 10.0kb downstream 15690 true Chr07: 10753725-10769414 Phaseolus vulgaris
Phvul.007G099000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10753725-10763724 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297544 5265 Fabidae View MSA
124061929 5270 Rosid View MSA
123753233 5271 Pentapetalae View MSA
122790544 5272 Eudicot View MSA
122048322 5273 Angiosperm View MSA
121344080 5274 Embryophyte View MSA
123427532 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.232605 0.0 0.88853 Low Low
cufflinks 2.07672 0.0 6.34592   High
cufflinks 0.559014 0.0 1.98233 Low  
cufflinks 0.705645 0.0 2.4376    
cufflinks 1.01183 0.0 3.36061    
cufflinks 0.403932 0.0 1.47318 Low  
cufflinks 0.405245 0.0 1.47577 Low  
cufflinks 0.350955 0.0 1.29604 Low  
cufflinks 0.703236 0.0 2.42719    
cufflinks 1.62745 0.0 5.11545   High
cufflinks 1.25948 0.0 4.07527    

0 Strain