Gene : Phvul.004G151525 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1543
Name:  ? Phvul.004G151525 Secondary Identifier:  ? PAC:37162433
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G151525 0.5kb upstream 0.5kb upstream 1034 true Chr04: 45383639-45384672 Phaseolus vulgaris
Phvul.004G151525 0.5kb upstream 0.5kb upstream 500 false Chr04: 45384173-45384672 Phaseolus vulgaris
Phvul.004G151525 0.5kb downstream 0.5kb downstream 1034 true Chr04: 45383139-45384172 Phaseolus vulgaris
Phvul.004G151525 0.5kb downstream 0.5kb downstream 500 false Chr04: 45383139-45383638 Phaseolus vulgaris
Phvul.004G151525 1.0kb upstream 1.0kb upstream 1534 true Chr04: 45383639-45385172 Phaseolus vulgaris
Phvul.004G151525 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45384173-45385172 Phaseolus vulgaris
Phvul.004G151525 1.0kb downstream 1.0kb downstream 1534 true Chr04: 45382639-45384172 Phaseolus vulgaris
Phvul.004G151525 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45382639-45383638 Phaseolus vulgaris
Phvul.004G151525 2.0kb upstream 2.0kb upstream 2534 true Chr04: 45383639-45386172 Phaseolus vulgaris
Phvul.004G151525 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45384173-45386172 Phaseolus vulgaris
Phvul.004G151525 2.0kb downstream 2.0kb downstream 2534 true Chr04: 45381639-45384172 Phaseolus vulgaris
Phvul.004G151525 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45381639-45383638 Phaseolus vulgaris
Phvul.004G151525 5.0kb upstream 5.0kb upstream 5534 true Chr04: 45383639-45389172 Phaseolus vulgaris
Phvul.004G151525 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45384173-45389172 Phaseolus vulgaris
Phvul.004G151525 5.0kb downstream 5.0kb downstream 5534 true Chr04: 45378639-45384172 Phaseolus vulgaris
Phvul.004G151525 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45378639-45383638 Phaseolus vulgaris
Phvul.004G151525 10.0kb upstream 10.0kb upstream 10534 true Chr04: 45383639-45394172 Phaseolus vulgaris
Phvul.004G151525 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45384173-45394172 Phaseolus vulgaris
Phvul.004G151525 10.0kb downstream 10.0kb downstream 10534 true Chr04: 45373639-45384172 Phaseolus vulgaris
Phvul.004G151525 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45373639-45383638 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309444 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7293 0.0 35.6038    
cufflinks 17.9653 0.0 52.2353    
cufflinks 16.0702 0.0 47.891    
cufflinks 32.6708 0.0 88.2463    
cufflinks 27.1425 0.0 75.3274    
cufflinks 14.1057 0.0 42.3412    
cufflinks 20.1856 0.0 57.7266    
cufflinks 62.1081 0.0 163.673 High High
cufflinks 12.0101 0.0 36.2459    
cufflinks 8.5388 0.0 26.9465   Low
cufflinks 35.3264 0.0 95.6015 High  

0 Strain