Gene : Phvul.004G150200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10091//PTHR10091:SF8 - ALDOSE-1-EPIMERASE // SUBFAMILY NOT NAMED Genomic Order:  1529
Name:  ? Phvul.004G150200 Secondary Identifier:  ? PAC:37163350
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY66-422 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G150200 0.5kb upstream 0.5kb upstream 3332 true Chr04: 45214907-45218238 Phaseolus vulgaris
Phvul.004G150200 0.5kb upstream 0.5kb upstream 500 false Chr04: 45214907-45215406 Phaseolus vulgaris
Phvul.004G150200 0.5kb downstream 0.5kb downstream 3332 true Chr04: 45215407-45218738 Phaseolus vulgaris
Phvul.004G150200 0.5kb downstream 0.5kb downstream 500 false Chr04: 45218239-45218738 Phaseolus vulgaris
Phvul.004G150200 1.0kb upstream 1.0kb upstream 3832 true Chr04: 45214407-45218238 Phaseolus vulgaris
Phvul.004G150200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45214407-45215406 Phaseolus vulgaris
Phvul.004G150200 1.0kb downstream 1.0kb downstream 3832 true Chr04: 45215407-45219238 Phaseolus vulgaris
Phvul.004G150200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45218239-45219238 Phaseolus vulgaris
Phvul.004G150200 2.0kb upstream 2.0kb upstream 4832 true Chr04: 45213407-45218238 Phaseolus vulgaris
Phvul.004G150200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45213407-45215406 Phaseolus vulgaris
Phvul.004G150200 2.0kb downstream 2.0kb downstream 4832 true Chr04: 45215407-45220238 Phaseolus vulgaris
Phvul.004G150200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45218239-45220238 Phaseolus vulgaris
Phvul.004G150200 5.0kb upstream 5.0kb upstream 7832 true Chr04: 45210407-45218238 Phaseolus vulgaris
Phvul.004G150200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45210407-45215406 Phaseolus vulgaris
Phvul.004G150200 5.0kb downstream 5.0kb downstream 7832 true Chr04: 45215407-45223238 Phaseolus vulgaris
Phvul.004G150200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45218239-45223238 Phaseolus vulgaris
Phvul.004G150200 10.0kb upstream 10.0kb upstream 12832 true Chr04: 45205407-45218238 Phaseolus vulgaris
Phvul.004G150200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45205407-45215406 Phaseolus vulgaris
Phvul.004G150200 10.0kb downstream 10.0kb downstream 12832 true Chr04: 45215407-45228238 Phaseolus vulgaris
Phvul.004G150200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45218239-45228238 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314642 5265 Fabidae View MSA
124068882 5270 Rosid View MSA
123737067 5271 Pentapetalae View MSA
122789360 5272 Eudicot View MSA
122043649 5273 Angiosperm View MSA
121346493 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4801 0.0 60.8596    
cufflinks 32.7742 0.0 84.7349 High High
cufflinks 19.075 0.0 49.7362    
cufflinks 46.4157 0.0 120.651 High High
cufflinks 18.7754 0.0 49.1808    
cufflinks 18.5782 0.0 48.5291    
cufflinks 12.3761 0.0 33.1361   Low
cufflinks 9.9383 0.0 27.0078   Low
cufflinks 20.0346 0.0 52.1793    
cufflinks 23.2381 0.0 60.298    
cufflinks 22.1902 0.0 57.6933    

0 Strain