Gene : Phvul.007G097000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  981
Name:  ? Phvul.007G097000 Secondary Identifier:  ? PAC:37167006
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G097000 0.5kb upstream 0.5kb upstream 8114 true Chr07: 10419422-10427535 Phaseolus vulgaris
Phvul.007G097000 0.5kb upstream 0.5kb upstream 500 false Chr07: 10419422-10419921 Phaseolus vulgaris
Phvul.007G097000 0.5kb downstream 0.5kb downstream 8114 true Chr07: 10419922-10428035 Phaseolus vulgaris
Phvul.007G097000 0.5kb downstream 0.5kb downstream 500 false Chr07: 10427536-10428035 Phaseolus vulgaris
Phvul.007G097000 1.0kb upstream 1.0kb upstream 8614 true Chr07: 10418922-10427535 Phaseolus vulgaris
Phvul.007G097000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10418922-10419921 Phaseolus vulgaris
Phvul.007G097000 1.0kb downstream 1.0kb downstream 8614 true Chr07: 10419922-10428535 Phaseolus vulgaris
Phvul.007G097000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10427536-10428535 Phaseolus vulgaris
Phvul.007G097000 2.0kb upstream 2.0kb upstream 9614 true Chr07: 10417922-10427535 Phaseolus vulgaris
Phvul.007G097000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10417922-10419921 Phaseolus vulgaris
Phvul.007G097000 2.0kb downstream 2.0kb downstream 9614 true Chr07: 10419922-10429535 Phaseolus vulgaris
Phvul.007G097000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10427536-10429535 Phaseolus vulgaris
Phvul.007G097000 5.0kb upstream 5.0kb upstream 12614 true Chr07: 10414922-10427535 Phaseolus vulgaris
Phvul.007G097000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10414922-10419921 Phaseolus vulgaris
Phvul.007G097000 5.0kb downstream 5.0kb downstream 12614 true Chr07: 10419922-10432535 Phaseolus vulgaris
Phvul.007G097000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10427536-10432535 Phaseolus vulgaris
Phvul.007G097000 10.0kb upstream 10.0kb upstream 17614 true Chr07: 10409922-10427535 Phaseolus vulgaris
Phvul.007G097000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10409922-10419921 Phaseolus vulgaris
Phvul.007G097000 10.0kb downstream 10.0kb downstream 17614 true Chr07: 10419922-10437535 Phaseolus vulgaris
Phvul.007G097000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10427536-10437535 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305977 5265 Fabidae View MSA
124066333 5270 Rosid View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.3349 0.0 10.4261    
cufflinks 3.30773 0.0 10.3671    
cufflinks 4.27198 0.0 12.9707    
cufflinks 3.89936 0.0 12.0875    
cufflinks 2.15612 0.0 7.14269   Low
cufflinks 2.80884 0.0 8.96614    
cufflinks 3.16828 0.0 9.98183    
cufflinks 3.99534 0.0 12.2068    
cufflinks 2.4605 0.0 7.99688    
cufflinks 6.22365 0.0 18.1577   High
cufflinks 2.44288 0.0 7.96535   Low

0 Strain