Gene : Phvul.007G098700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  998
Name:  ? Phvul.007G098700 Secondary Identifier:  ? PAC:37164855
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G098700 0.5kb upstream 0.5kb upstream 4060 true Chr07: 10712444-10716503 Phaseolus vulgaris
Phvul.007G098700 0.5kb upstream 0.5kb upstream 500 false Chr07: 10712444-10712943 Phaseolus vulgaris
Phvul.007G098700 0.5kb downstream 0.5kb downstream 4060 true Chr07: 10712944-10717003 Phaseolus vulgaris
Phvul.007G098700 0.5kb downstream 0.5kb downstream 500 false Chr07: 10716504-10717003 Phaseolus vulgaris
Phvul.007G098700 1.0kb upstream 1.0kb upstream 4560 true Chr07: 10711944-10716503 Phaseolus vulgaris
Phvul.007G098700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10711944-10712943 Phaseolus vulgaris
Phvul.007G098700 1.0kb downstream 1.0kb downstream 4560 true Chr07: 10712944-10717503 Phaseolus vulgaris
Phvul.007G098700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10716504-10717503 Phaseolus vulgaris
Phvul.007G098700 2.0kb upstream 2.0kb upstream 5560 true Chr07: 10710944-10716503 Phaseolus vulgaris
Phvul.007G098700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10710944-10712943 Phaseolus vulgaris
Phvul.007G098700 2.0kb downstream 2.0kb downstream 5560 true Chr07: 10712944-10718503 Phaseolus vulgaris
Phvul.007G098700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10716504-10718503 Phaseolus vulgaris
Phvul.007G098700 5.0kb upstream 5.0kb upstream 8560 true Chr07: 10707944-10716503 Phaseolus vulgaris
Phvul.007G098700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10707944-10712943 Phaseolus vulgaris
Phvul.007G098700 5.0kb downstream 5.0kb downstream 8560 true Chr07: 10712944-10721503 Phaseolus vulgaris
Phvul.007G098700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10716504-10721503 Phaseolus vulgaris
Phvul.007G098700 10.0kb upstream 10.0kb upstream 13560 true Chr07: 10702944-10716503 Phaseolus vulgaris
Phvul.007G098700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10702944-10712943 Phaseolus vulgaris
Phvul.007G098700 10.0kb downstream 10.0kb downstream 13560 true Chr07: 10712944-10726503 Phaseolus vulgaris
Phvul.007G098700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10716504-10726503 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308231 5265 Fabidae View MSA
124065418 5270 Rosid View MSA
123739906 5271 Pentapetalae View MSA
122790994 5272 Eudicot View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3618 0.0 29.9312    
cufflinks 9.97549 0.0 26.5341    
cufflinks 8.23307 0.0 22.1858    
cufflinks 7.77921 0.0 21.2271   Low
cufflinks 6.91048 0.0 19.0422   Low
cufflinks 11.5427 0.0 30.3902    
cufflinks 15.3442 0.0 39.8783   High
cufflinks 10.6459 0.0 28.1117    
cufflinks 18.6142 0.0 48.1725   High
cufflinks 15.3033 0.0 39.8022   High
cufflinks 9.90053 0.0 26.446    

0 Strain