Gene : Phvul.004G150800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1535
Name:  ? Phvul.004G150800 Secondary Identifier:  ? PAC:37162941
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G150800 0.5kb upstream 0.5kb upstream 3059 true Chr04: 45283246-45286304 Phaseolus vulgaris
Phvul.004G150800 0.5kb upstream 0.5kb upstream 500 false Chr04: 45285805-45286304 Phaseolus vulgaris
Phvul.004G150800 0.5kb downstream 0.5kb downstream 3059 true Chr04: 45282746-45285804 Phaseolus vulgaris
Phvul.004G150800 0.5kb downstream 0.5kb downstream 500 false Chr04: 45282746-45283245 Phaseolus vulgaris
Phvul.004G150800 1.0kb upstream 1.0kb upstream 3559 true Chr04: 45283246-45286804 Phaseolus vulgaris
Phvul.004G150800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45285805-45286804 Phaseolus vulgaris
Phvul.004G150800 1.0kb downstream 1.0kb downstream 3559 true Chr04: 45282246-45285804 Phaseolus vulgaris
Phvul.004G150800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45282246-45283245 Phaseolus vulgaris
Phvul.004G150800 2.0kb upstream 2.0kb upstream 4559 true Chr04: 45283246-45287804 Phaseolus vulgaris
Phvul.004G150800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45285805-45287804 Phaseolus vulgaris
Phvul.004G150800 2.0kb downstream 2.0kb downstream 4559 true Chr04: 45281246-45285804 Phaseolus vulgaris
Phvul.004G150800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45281246-45283245 Phaseolus vulgaris
Phvul.004G150800 5.0kb upstream 5.0kb upstream 7559 true Chr04: 45283246-45290804 Phaseolus vulgaris
Phvul.004G150800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45285805-45290804 Phaseolus vulgaris
Phvul.004G150800 5.0kb downstream 5.0kb downstream 7559 true Chr04: 45278246-45285804 Phaseolus vulgaris
Phvul.004G150800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45278246-45283245 Phaseolus vulgaris
Phvul.004G150800 10.0kb upstream 10.0kb upstream 12559 true Chr04: 45283246-45295804 Phaseolus vulgaris
Phvul.004G150800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45285805-45295804 Phaseolus vulgaris
Phvul.004G150800 10.0kb downstream 10.0kb downstream 12559 true Chr04: 45273246-45285804 Phaseolus vulgaris
Phvul.004G150800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45273246-45283245 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311894 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5183 0.0 58.5291    
cufflinks 12.5534 0.0 35.8799    
cufflinks 17.7592 0.0 49.0441    
cufflinks 37.9184 0.0 99.4303 High High
cufflinks 10.0058 0.0 29.5218    
cufflinks 6.18181 0.0 19.1398   Low
cufflinks 8.05538 0.0 24.1302   Low
cufflinks 14.5705 0.0 40.8217    
cufflinks 10.8478 0.0 31.4916    
cufflinks 14.0437 0.0 39.7686    
cufflinks 11.0946 0.0 32.2788    

0 Strain