Gene : Phvul.004G150600 P. vulgaris v2.1
Defline:  (1 of 16) K13947 - auxin efflux carrier family (PIN) Genomic Order:  1533
Name:  ? Phvul.004G150600 Secondary Identifier:  ? PAC:37162279
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G150600 0.5kb upstream 0.5kb upstream 4260 true Chr04: 45265768-45270027 Phaseolus vulgaris
Phvul.004G150600 0.5kb upstream 0.5kb upstream 500 false Chr04: 45269528-45270027 Phaseolus vulgaris
Phvul.004G150600 0.5kb downstream 0.5kb downstream 4260 true Chr04: 45265268-45269527 Phaseolus vulgaris
Phvul.004G150600 0.5kb downstream 0.5kb downstream 500 false Chr04: 45265268-45265767 Phaseolus vulgaris
Phvul.004G150600 1.0kb upstream 1.0kb upstream 4760 true Chr04: 45265768-45270527 Phaseolus vulgaris
Phvul.004G150600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45269528-45270527 Phaseolus vulgaris
Phvul.004G150600 1.0kb downstream 1.0kb downstream 4760 true Chr04: 45264768-45269527 Phaseolus vulgaris
Phvul.004G150600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45264768-45265767 Phaseolus vulgaris
Phvul.004G150600 2.0kb upstream 2.0kb upstream 5760 true Chr04: 45265768-45271527 Phaseolus vulgaris
Phvul.004G150600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45269528-45271527 Phaseolus vulgaris
Phvul.004G150600 2.0kb downstream 2.0kb downstream 5760 true Chr04: 45263768-45269527 Phaseolus vulgaris
Phvul.004G150600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45263768-45265767 Phaseolus vulgaris
Phvul.004G150600 5.0kb upstream 5.0kb upstream 8760 true Chr04: 45265768-45274527 Phaseolus vulgaris
Phvul.004G150600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45269528-45274527 Phaseolus vulgaris
Phvul.004G150600 5.0kb downstream 5.0kb downstream 8760 true Chr04: 45260768-45269527 Phaseolus vulgaris
Phvul.004G150600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45260768-45265767 Phaseolus vulgaris
Phvul.004G150600 10.0kb upstream 10.0kb upstream 13760 true Chr04: 45265768-45279527 Phaseolus vulgaris
Phvul.004G150600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45269528-45279527 Phaseolus vulgaris
Phvul.004G150600 10.0kb downstream 10.0kb downstream 13760 true Chr04: 45255768-45269527 Phaseolus vulgaris
Phvul.004G150600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45255768-45265767 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307644 5265 Fabidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.4594 0.0 79.7928    
cufflinks 28.6006 0.0 74.7325    
cufflinks 5.49033 0.0 15.0142   Low
cufflinks 54.3225 0.0 148.479 High  
cufflinks 86.201 0.0 248.155 High  
cufflinks 10.0107 0.0 26.2536   Low
cufflinks 24.9855 0.0 64.9735    
cufflinks 10.3039 0.0 26.9683   Low
cufflinks 29.4593 0.0 77.1127    
cufflinks 155.288 0.0 488.953 High High
cufflinks 127.87 0.0 388.652 High High

0 Strain