Gene : Phvul.007G083600 P. vulgaris v2.1
Defline:  (1 of 1) 3.4.17.22 - Metallocarboxypeptidase D / Carboxypeptidase D Genomic Order:  844
Name:  ? Phvul.007G083600 Secondary Identifier:  ? PAC:37164352
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G083600 0.5kb upstream 0.5kb upstream 8219 true Chr07: 8420488-8428706 Phaseolus vulgaris
Phvul.007G083600 0.5kb upstream 0.5kb upstream 500 false Chr07: 8420488-8420987 Phaseolus vulgaris
Phvul.007G083600 0.5kb downstream 0.5kb downstream 8219 true Chr07: 8420988-8429206 Phaseolus vulgaris
Phvul.007G083600 0.5kb downstream 0.5kb downstream 500 false Chr07: 8428707-8429206 Phaseolus vulgaris
Phvul.007G083600 1.0kb upstream 1.0kb upstream 8719 true Chr07: 8419988-8428706 Phaseolus vulgaris
Phvul.007G083600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8419988-8420987 Phaseolus vulgaris
Phvul.007G083600 1.0kb downstream 1.0kb downstream 8719 true Chr07: 8420988-8429706 Phaseolus vulgaris
Phvul.007G083600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8428707-8429706 Phaseolus vulgaris
Phvul.007G083600 2.0kb upstream 2.0kb upstream 9719 true Chr07: 8418988-8428706 Phaseolus vulgaris
Phvul.007G083600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8418988-8420987 Phaseolus vulgaris
Phvul.007G083600 2.0kb downstream 2.0kb downstream 9719 true Chr07: 8420988-8430706 Phaseolus vulgaris
Phvul.007G083600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8428707-8430706 Phaseolus vulgaris
Phvul.007G083600 5.0kb upstream 5.0kb upstream 12719 true Chr07: 8415988-8428706 Phaseolus vulgaris
Phvul.007G083600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8415988-8420987 Phaseolus vulgaris
Phvul.007G083600 5.0kb downstream 5.0kb downstream 12719 true Chr07: 8420988-8433706 Phaseolus vulgaris
Phvul.007G083600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8428707-8433706 Phaseolus vulgaris
Phvul.007G083600 10.0kb upstream 10.0kb upstream 17719 true Chr07: 8410988-8428706 Phaseolus vulgaris
Phvul.007G083600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8410988-8420987 Phaseolus vulgaris
Phvul.007G083600 10.0kb downstream 10.0kb downstream 17719 true Chr07: 8420988-8438706 Phaseolus vulgaris
Phvul.007G083600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8428707-8438706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026287 5273 Angiosperm View MSA
122307423 5265 Fabidae View MSA
124063541 5270 Rosid View MSA
123739796 5271 Pentapetalae View MSA
122793886 5272 Eudicot View MSA
121351102 5274 Embryophyte View MSA
123424980 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6483 0.0 42.053   High
cufflinks 7.44579 0.0 27.5006    
cufflinks 10.3344 0.0 35.509    
cufflinks 7.26893 0.0 23.4967    
cufflinks 7.46076 0.0 27.9522    
cufflinks 5.13671 0.0 20.3616   Low
cufflinks 9.61687 0.0 33.6402    
cufflinks 11.1114 0.0 37.675    
cufflinks 8.69152 0.0 31.1749    
cufflinks 16.627 0.0 53.723   High
cufflinks 6.2124 0.0 24.3238   Low

0 Strain