Gene : Phvul.007G082400 P. vulgaris v2.1
Defline:  (1 of 1) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Genomic Order:  832
Name:  ? Phvul.007G082400 Secondary Identifier:  ? PAC:37164303
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G082400 0.5kb upstream 0.5kb upstream 8432 true Chr07: 8273159-8281590 Phaseolus vulgaris
Phvul.007G082400 0.5kb upstream 0.5kb upstream 500 false Chr07: 8273159-8273658 Phaseolus vulgaris
Phvul.007G082400 0.5kb downstream 0.5kb downstream 8432 true Chr07: 8273659-8282090 Phaseolus vulgaris
Phvul.007G082400 0.5kb downstream 0.5kb downstream 500 false Chr07: 8281591-8282090 Phaseolus vulgaris
Phvul.007G082400 1.0kb upstream 1.0kb upstream 8932 true Chr07: 8272659-8281590 Phaseolus vulgaris
Phvul.007G082400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8272659-8273658 Phaseolus vulgaris
Phvul.007G082400 1.0kb downstream 1.0kb downstream 8932 true Chr07: 8273659-8282590 Phaseolus vulgaris
Phvul.007G082400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8281591-8282590 Phaseolus vulgaris
Phvul.007G082400 2.0kb upstream 2.0kb upstream 9932 true Chr07: 8271659-8281590 Phaseolus vulgaris
Phvul.007G082400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8271659-8273658 Phaseolus vulgaris
Phvul.007G082400 2.0kb downstream 2.0kb downstream 9932 true Chr07: 8273659-8283590 Phaseolus vulgaris
Phvul.007G082400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8281591-8283590 Phaseolus vulgaris
Phvul.007G082400 5.0kb upstream 5.0kb upstream 12932 true Chr07: 8268659-8281590 Phaseolus vulgaris
Phvul.007G082400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8268659-8273658 Phaseolus vulgaris
Phvul.007G082400 5.0kb downstream 5.0kb downstream 12932 true Chr07: 8273659-8286590 Phaseolus vulgaris
Phvul.007G082400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8281591-8286590 Phaseolus vulgaris
Phvul.007G082400 10.0kb upstream 10.0kb upstream 17932 true Chr07: 8263659-8281590 Phaseolus vulgaris
Phvul.007G082400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8263659-8273658 Phaseolus vulgaris
Phvul.007G082400 10.0kb downstream 10.0kb downstream 17932 true Chr07: 8273659-8291590 Phaseolus vulgaris
Phvul.007G082400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8281591-8291590 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297403 5265 Fabidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.02228 0.0 9.03737   Low
cufflinks 3.62305 0.0 10.669    
cufflinks 4.66137 0.0 13.3408   High
cufflinks 3.13763 0.0 9.47989    
cufflinks 2.9803 0.0 9.06877   Low
cufflinks 3.38307 0.0 10.0263    
cufflinks 4.62752 0.0 13.2561    
cufflinks 5.19025 0.0 14.6498   High
cufflinks 4.44469 0.0 12.8021    
cufflinks 4.1087 0.0 11.9428    
cufflinks 3.464 0.0 10.3177    

0 Strain