Gene : Phvul.007G083000 P. vulgaris v2.1
Genomic Order:  838 Name:  ? Phvul.007G083000
Secondary Identifier:  ? PAC:37164188
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G083000 0.5kb upstream 0.5kb upstream 3397 true Chr07: 8332032-8335428 Phaseolus vulgaris
Phvul.007G083000 0.5kb upstream 0.5kb upstream 500 false Chr07: 8334929-8335428 Phaseolus vulgaris
Phvul.007G083000 0.5kb downstream 0.5kb downstream 3397 true Chr07: 8331532-8334928 Phaseolus vulgaris
Phvul.007G083000 0.5kb downstream 0.5kb downstream 500 false Chr07: 8331532-8332031 Phaseolus vulgaris
Phvul.007G083000 1.0kb upstream 1.0kb upstream 3897 true Chr07: 8332032-8335928 Phaseolus vulgaris
Phvul.007G083000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8334929-8335928 Phaseolus vulgaris
Phvul.007G083000 1.0kb downstream 1.0kb downstream 3897 true Chr07: 8331032-8334928 Phaseolus vulgaris
Phvul.007G083000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8331032-8332031 Phaseolus vulgaris
Phvul.007G083000 2.0kb upstream 2.0kb upstream 4897 true Chr07: 8332032-8336928 Phaseolus vulgaris
Phvul.007G083000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8334929-8336928 Phaseolus vulgaris
Phvul.007G083000 2.0kb downstream 2.0kb downstream 4897 true Chr07: 8330032-8334928 Phaseolus vulgaris
Phvul.007G083000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8330032-8332031 Phaseolus vulgaris
Phvul.007G083000 5.0kb upstream 5.0kb upstream 7897 true Chr07: 8332032-8339928 Phaseolus vulgaris
Phvul.007G083000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8334929-8339928 Phaseolus vulgaris
Phvul.007G083000 5.0kb downstream 5.0kb downstream 7897 true Chr07: 8327032-8334928 Phaseolus vulgaris
Phvul.007G083000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8327032-8332031 Phaseolus vulgaris
Phvul.007G083000 10.0kb upstream 10.0kb upstream 12897 true Chr07: 8332032-8344928 Phaseolus vulgaris
Phvul.007G083000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8334929-8344928 Phaseolus vulgaris
Phvul.007G083000 10.0kb downstream 10.0kb downstream 12897 true Chr07: 8322032-8334928 Phaseolus vulgaris
Phvul.007G083000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8322032-8332031 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310555 5265 Fabidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.3942 0.0 99.2886 High  
cufflinks 14.8127 0.0 42.7303    
cufflinks 85.6614 0.0 221.472 High High
cufflinks 28.4367 0.0 77.2838    
cufflinks 14.4188 0.0 41.937    
cufflinks 30.8775 0.0 83.235    
cufflinks 3.33492 0.0 11.3651   Low
cufflinks 7.90572 0.0 24.3622    
cufflinks 2.19766 0.0 7.84649   Low
cufflinks 9.48329 0.0 28.8811    
cufflinks 15.1922 0.0 43.8668    

0 Strain