Gene : Phvul.004G138800 P. vulgaris v2.1
Genomic Order:  1414 Name:  ? Phvul.004G138800
Secondary Identifier:  ? PAC:37162691
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G138800 0.5kb upstream 0.5kb upstream 8169 true Chr04: 43823887-43832055 Phaseolus vulgaris
Phvul.004G138800 0.5kb upstream 0.5kb upstream 500 false Chr04: 43823887-43824386 Phaseolus vulgaris
Phvul.004G138800 0.5kb downstream 0.5kb downstream 8169 true Chr04: 43824387-43832555 Phaseolus vulgaris
Phvul.004G138800 0.5kb downstream 0.5kb downstream 500 false Chr04: 43832056-43832555 Phaseolus vulgaris
Phvul.004G138800 1.0kb upstream 1.0kb upstream 8669 true Chr04: 43823387-43832055 Phaseolus vulgaris
Phvul.004G138800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43823387-43824386 Phaseolus vulgaris
Phvul.004G138800 1.0kb downstream 1.0kb downstream 8669 true Chr04: 43824387-43833055 Phaseolus vulgaris
Phvul.004G138800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43832056-43833055 Phaseolus vulgaris
Phvul.004G138800 2.0kb upstream 2.0kb upstream 9669 true Chr04: 43822387-43832055 Phaseolus vulgaris
Phvul.004G138800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43822387-43824386 Phaseolus vulgaris
Phvul.004G138800 2.0kb downstream 2.0kb downstream 9669 true Chr04: 43824387-43834055 Phaseolus vulgaris
Phvul.004G138800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43832056-43834055 Phaseolus vulgaris
Phvul.004G138800 5.0kb upstream 5.0kb upstream 12669 true Chr04: 43819387-43832055 Phaseolus vulgaris
Phvul.004G138800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43819387-43824386 Phaseolus vulgaris
Phvul.004G138800 5.0kb downstream 5.0kb downstream 12669 true Chr04: 43824387-43837055 Phaseolus vulgaris
Phvul.004G138800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43832056-43837055 Phaseolus vulgaris
Phvul.004G138800 10.0kb upstream 10.0kb upstream 17669 true Chr04: 43814387-43832055 Phaseolus vulgaris
Phvul.004G138800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43814387-43824386 Phaseolus vulgaris
Phvul.004G138800 10.0kb downstream 10.0kb downstream 17669 true Chr04: 43824387-43842055 Phaseolus vulgaris
Phvul.004G138800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43832056-43842055 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304994 5265 Fabidae View MSA
124070765 5270 Rosid View MSA
123742721 5271 Pentapetalae View MSA
122770367 5272 Eudicot View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.305465 0.0 1.09021 Low Low
cufflinks 0.66236 0.0 2.17488    
cufflinks 0.817828 0.0 2.61039    
cufflinks 0.842752 0.0 2.72081    
cufflinks 0.53788 0.0 1.82866 Low  
cufflinks 1.1902 0.0 3.65326    
cufflinks 1.8705 0.0 5.44876   High
cufflinks 1.90593 0.0 5.50293   High
cufflinks 1.20355 0.0 3.69797    
cufflinks 1.74459 0.0 5.13669   High
cufflinks 0.467476 0.0 1.60893 Low Low

0 Strain