Gene : Phvul.004G138850 P. vulgaris v2.1
Defline:  (1 of 10) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  1415
Name:  ? Phvul.004G138850 Secondary Identifier:  ? PAC:37161753
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G138850 0.5kb upstream 0.5kb upstream 5828 true Chr04: 43852003-43857830 Phaseolus vulgaris
Phvul.004G138850 0.5kb upstream 0.5kb upstream 500 false Chr04: 43852003-43852502 Phaseolus vulgaris
Phvul.004G138850 0.5kb downstream 0.5kb downstream 5828 true Chr04: 43852503-43858330 Phaseolus vulgaris
Phvul.004G138850 0.5kb downstream 0.5kb downstream 500 false Chr04: 43857831-43858330 Phaseolus vulgaris
Phvul.004G138850 1.0kb upstream 1.0kb upstream 6328 true Chr04: 43851503-43857830 Phaseolus vulgaris
Phvul.004G138850 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43851503-43852502 Phaseolus vulgaris
Phvul.004G138850 1.0kb downstream 1.0kb downstream 6328 true Chr04: 43852503-43858830 Phaseolus vulgaris
Phvul.004G138850 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43857831-43858830 Phaseolus vulgaris
Phvul.004G138850 2.0kb upstream 2.0kb upstream 7328 true Chr04: 43850503-43857830 Phaseolus vulgaris
Phvul.004G138850 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43850503-43852502 Phaseolus vulgaris
Phvul.004G138850 2.0kb downstream 2.0kb downstream 7328 true Chr04: 43852503-43859830 Phaseolus vulgaris
Phvul.004G138850 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43857831-43859830 Phaseolus vulgaris
Phvul.004G138850 5.0kb upstream 5.0kb upstream 10328 true Chr04: 43847503-43857830 Phaseolus vulgaris
Phvul.004G138850 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43847503-43852502 Phaseolus vulgaris
Phvul.004G138850 5.0kb downstream 5.0kb downstream 10328 true Chr04: 43852503-43862830 Phaseolus vulgaris
Phvul.004G138850 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43857831-43862830 Phaseolus vulgaris
Phvul.004G138850 10.0kb upstream 10.0kb upstream 15328 true Chr04: 43842503-43857830 Phaseolus vulgaris
Phvul.004G138850 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43842503-43852502 Phaseolus vulgaris
Phvul.004G138850 10.0kb downstream 10.0kb downstream 15328 true Chr04: 43852503-43867830 Phaseolus vulgaris
Phvul.004G138850 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43857831-43867830 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304994 5265 Fabidae View MSA
124070765 5270 Rosid View MSA
123742721 5271 Pentapetalae View MSA
122770367 5272 Eudicot View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.52953 0.0 2.69163   Low
cufflinks 0.989218 0.0 4.29805    
cufflinks 1.25982 0.0 5.89676    
cufflinks 1.32353 0.0 5.55997    
cufflinks 0.977888 0.0 5.44246    
cufflinks 1.56254 0.0 6.13481    
cufflinks 2.05092 0.0 8.56954   High
cufflinks 2.14059 0.0 7.43716   High
cufflinks 1.47097 0.0 5.924    
cufflinks 2.08035 0.0 8.74688   High
cufflinks 0.727659 0.0 3.56335   Low

0 Strain