Gene : Phvul.007G086600 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  874
Name:  ? Phvul.007G086600 Secondary Identifier:  ? PAC:37165267
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G086600 0.5kb upstream 0.5kb upstream 1191 true Chr07: 8743372-8744562 Phaseolus vulgaris
Phvul.007G086600 0.5kb upstream 0.5kb upstream 500 false Chr07: 8743372-8743871 Phaseolus vulgaris
Phvul.007G086600 0.5kb downstream 0.5kb downstream 1191 true Chr07: 8743872-8745062 Phaseolus vulgaris
Phvul.007G086600 0.5kb downstream 0.5kb downstream 500 false Chr07: 8744563-8745062 Phaseolus vulgaris
Phvul.007G086600 1.0kb upstream 1.0kb upstream 1691 true Chr07: 8742872-8744562 Phaseolus vulgaris
Phvul.007G086600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8742872-8743871 Phaseolus vulgaris
Phvul.007G086600 1.0kb downstream 1.0kb downstream 1691 true Chr07: 8743872-8745562 Phaseolus vulgaris
Phvul.007G086600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8744563-8745562 Phaseolus vulgaris
Phvul.007G086600 2.0kb upstream 2.0kb upstream 2691 true Chr07: 8741872-8744562 Phaseolus vulgaris
Phvul.007G086600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8741872-8743871 Phaseolus vulgaris
Phvul.007G086600 2.0kb downstream 2.0kb downstream 2691 true Chr07: 8743872-8746562 Phaseolus vulgaris
Phvul.007G086600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8744563-8746562 Phaseolus vulgaris
Phvul.007G086600 5.0kb upstream 5.0kb upstream 5691 true Chr07: 8738872-8744562 Phaseolus vulgaris
Phvul.007G086600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8738872-8743871 Phaseolus vulgaris
Phvul.007G086600 5.0kb downstream 5.0kb downstream 5691 true Chr07: 8743872-8749562 Phaseolus vulgaris
Phvul.007G086600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8744563-8749562 Phaseolus vulgaris
Phvul.007G086600 10.0kb upstream 10.0kb upstream 10691 true Chr07: 8733872-8744562 Phaseolus vulgaris
Phvul.007G086600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8733872-8743871 Phaseolus vulgaris
Phvul.007G086600 10.0kb downstream 10.0kb downstream 10691 true Chr07: 8743872-8754562 Phaseolus vulgaris
Phvul.007G086600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8744563-8754562 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298508 5265 Fabidae View MSA
124037540 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.143118 0.0 0.658758 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.132002 0.0 0.613167 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.47176 0.0 1.94573 Low  
cufflinks 1.1596 0.0 4.46005    
cufflinks 0.835442 0.0 3.28861    
cufflinks 2.50934 0.0 9.04545   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.305729 0.0 1.31577 Low  

0 Strain