Gene : Phvul.007G085700 P. vulgaris v2.1
Defline:  (1 of 1) K14407 - cleavage stimulation factor subunit 2 (CSTF2, RNA15) Genomic Order:  865
Name:  ? Phvul.007G085700 Secondary Identifier:  ? PAC:37164610
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G085700 0.5kb upstream 0.5kb upstream 7368 true Chr07: 8682837-8690204 Phaseolus vulgaris
Phvul.007G085700 0.5kb upstream 0.5kb upstream 500 false Chr07: 8682837-8683336 Phaseolus vulgaris
Phvul.007G085700 0.5kb downstream 0.5kb downstream 7368 true Chr07: 8683337-8690704 Phaseolus vulgaris
Phvul.007G085700 0.5kb downstream 0.5kb downstream 500 false Chr07: 8690205-8690704 Phaseolus vulgaris
Phvul.007G085700 1.0kb upstream 1.0kb upstream 7868 true Chr07: 8682337-8690204 Phaseolus vulgaris
Phvul.007G085700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8682337-8683336 Phaseolus vulgaris
Phvul.007G085700 1.0kb downstream 1.0kb downstream 7868 true Chr07: 8683337-8691204 Phaseolus vulgaris
Phvul.007G085700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8690205-8691204 Phaseolus vulgaris
Phvul.007G085700 2.0kb upstream 2.0kb upstream 8868 true Chr07: 8681337-8690204 Phaseolus vulgaris
Phvul.007G085700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8681337-8683336 Phaseolus vulgaris
Phvul.007G085700 2.0kb downstream 2.0kb downstream 8868 true Chr07: 8683337-8692204 Phaseolus vulgaris
Phvul.007G085700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8690205-8692204 Phaseolus vulgaris
Phvul.007G085700 5.0kb upstream 5.0kb upstream 11868 true Chr07: 8678337-8690204 Phaseolus vulgaris
Phvul.007G085700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8678337-8683336 Phaseolus vulgaris
Phvul.007G085700 5.0kb downstream 5.0kb downstream 11868 true Chr07: 8683337-8695204 Phaseolus vulgaris
Phvul.007G085700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8690205-8695204 Phaseolus vulgaris
Phvul.007G085700 10.0kb upstream 10.0kb upstream 16868 true Chr07: 8673337-8690204 Phaseolus vulgaris
Phvul.007G085700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8673337-8683336 Phaseolus vulgaris
Phvul.007G085700 10.0kb downstream 10.0kb downstream 16868 true Chr07: 8683337-8700204 Phaseolus vulgaris
Phvul.007G085700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8690205-8700204 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041194 5273 Angiosperm View MSA
122302940 5265 Fabidae View MSA
124063438 5270 Rosid View MSA
123738960 5271 Pentapetalae View MSA
122787206 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121344917 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9769 0.0 33.994    
cufflinks 13.7512 0.0 35.8882    
cufflinks 14.777 0.0 38.4257    
cufflinks 14.9071 0.0 38.8145    
cufflinks 13.8217 0.0 36.1332    
cufflinks 10.4819 0.0 27.7825   Low
cufflinks 15.1556 0.0 39.3688    
cufflinks 13.762 0.0 35.8479    
cufflinks 16.7818 0.0 43.4929   High
cufflinks 17.0409 0.0 44.1673   High
cufflinks 13.5519 0.0 35.4308    

0 Strain