Gene : Phvul.007G086000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33219:SF1 - COFACTOR ASSEMBLY, COMPLEX C (B6F) Genomic Order:  868
Name:  ? Phvul.007G086000 Secondary Identifier:  ? PAC:37166333
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G086000 0.5kb upstream 0.5kb upstream 3734 true Chr07: 8699356-8703089 Phaseolus vulgaris
Phvul.007G086000 0.5kb upstream 0.5kb upstream 500 false Chr07: 8702590-8703089 Phaseolus vulgaris
Phvul.007G086000 0.5kb downstream 0.5kb downstream 3734 true Chr07: 8698856-8702589 Phaseolus vulgaris
Phvul.007G086000 0.5kb downstream 0.5kb downstream 500 false Chr07: 8698856-8699355 Phaseolus vulgaris
Phvul.007G086000 1.0kb upstream 1.0kb upstream 4234 true Chr07: 8699356-8703589 Phaseolus vulgaris
Phvul.007G086000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8702590-8703589 Phaseolus vulgaris
Phvul.007G086000 1.0kb downstream 1.0kb downstream 4234 true Chr07: 8698356-8702589 Phaseolus vulgaris
Phvul.007G086000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8698356-8699355 Phaseolus vulgaris
Phvul.007G086000 2.0kb upstream 2.0kb upstream 5234 true Chr07: 8699356-8704589 Phaseolus vulgaris
Phvul.007G086000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8702590-8704589 Phaseolus vulgaris
Phvul.007G086000 2.0kb downstream 2.0kb downstream 5234 true Chr07: 8697356-8702589 Phaseolus vulgaris
Phvul.007G086000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8697356-8699355 Phaseolus vulgaris
Phvul.007G086000 5.0kb upstream 5.0kb upstream 8234 true Chr07: 8699356-8707589 Phaseolus vulgaris
Phvul.007G086000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8702590-8707589 Phaseolus vulgaris
Phvul.007G086000 5.0kb downstream 5.0kb downstream 8234 true Chr07: 8694356-8702589 Phaseolus vulgaris
Phvul.007G086000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8694356-8699355 Phaseolus vulgaris
Phvul.007G086000 10.0kb upstream 10.0kb upstream 13234 true Chr07: 8699356-8712589 Phaseolus vulgaris
Phvul.007G086000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8702590-8712589 Phaseolus vulgaris
Phvul.007G086000 10.0kb downstream 10.0kb downstream 13234 true Chr07: 8689356-8702589 Phaseolus vulgaris
Phvul.007G086000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8689356-8699355 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307874 5265 Fabidae View MSA
124071156 5270 Rosid View MSA
123749054 5271 Pentapetalae View MSA
122791732 5272 Eudicot View MSA
122048332 5273 Angiosperm View MSA
121348595 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.22045 0.0 19.5564    
cufflinks 3.91588 0.0 12.9828    
cufflinks 29.2389 0.0 78.4148   High
cufflinks 5.02651 0.0 16.1856    
cufflinks 3.90132 0.0 13.0269    
cufflinks 18.5505 0.0 51.7848   High
cufflinks 0.119553 0.0 0.544322 Low Low
cufflinks 0.519522 0.0 2.06967    
cufflinks 0.19352 0.0 0.840446 Low Low
cufflinks 2.02855 0.0 7.23109    
cufflinks 1.61095 0.0 5.89012    

0 Strain