Gene : Phvul.004G141100 P. vulgaris v2.1
Defline:  (1 of 1) K03245 - translation initiation factor 3 subunit J (EIF3J) Genomic Order:  1438
Name:  ? Phvul.004G141100 Secondary Identifier:  ? PAC:37163744
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G141100 0.5kb upstream 0.5kb upstream 4277 true Chr04: 44073670-44077946 Phaseolus vulgaris
Phvul.004G141100 0.5kb upstream 0.5kb upstream 500 false Chr04: 44073670-44074169 Phaseolus vulgaris
Phvul.004G141100 0.5kb downstream 0.5kb downstream 4277 true Chr04: 44074170-44078446 Phaseolus vulgaris
Phvul.004G141100 0.5kb downstream 0.5kb downstream 500 false Chr04: 44077947-44078446 Phaseolus vulgaris
Phvul.004G141100 1.0kb upstream 1.0kb upstream 4777 true Chr04: 44073170-44077946 Phaseolus vulgaris
Phvul.004G141100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44073170-44074169 Phaseolus vulgaris
Phvul.004G141100 1.0kb downstream 1.0kb downstream 4777 true Chr04: 44074170-44078946 Phaseolus vulgaris
Phvul.004G141100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44077947-44078946 Phaseolus vulgaris
Phvul.004G141100 2.0kb upstream 2.0kb upstream 5777 true Chr04: 44072170-44077946 Phaseolus vulgaris
Phvul.004G141100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44072170-44074169 Phaseolus vulgaris
Phvul.004G141100 2.0kb downstream 2.0kb downstream 5777 true Chr04: 44074170-44079946 Phaseolus vulgaris
Phvul.004G141100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44077947-44079946 Phaseolus vulgaris
Phvul.004G141100 5.0kb upstream 5.0kb upstream 8777 true Chr04: 44069170-44077946 Phaseolus vulgaris
Phvul.004G141100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44069170-44074169 Phaseolus vulgaris
Phvul.004G141100 5.0kb downstream 5.0kb downstream 8777 true Chr04: 44074170-44082946 Phaseolus vulgaris
Phvul.004G141100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44077947-44082946 Phaseolus vulgaris
Phvul.004G141100 10.0kb upstream 10.0kb upstream 13777 true Chr04: 44064170-44077946 Phaseolus vulgaris
Phvul.004G141100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44064170-44074169 Phaseolus vulgaris
Phvul.004G141100 10.0kb downstream 10.0kb downstream 13777 true Chr04: 44074170-44087946 Phaseolus vulgaris
Phvul.004G141100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44077947-44087946 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305517 5265 Fabidae View MSA
124062872 5270 Rosid View MSA
123745342 5271 Pentapetalae View MSA
122795526 5272 Eudicot View MSA
122043857 5273 Angiosperm View MSA
121344885 5274 Embryophyte View MSA
123424883 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6894 0.0 69.2234   High
cufflinks 26.7127 0.0 69.4047   High
cufflinks 19.6484 0.0 51.62    
cufflinks 29.2641 0.0 76.0138   High
cufflinks 20.2275 0.0 53.4635    
cufflinks 21.4532 0.0 56.2143    
cufflinks 19.9339 0.0 52.4198    
cufflinks 21.311 0.0 55.6918    
cufflinks 26.2449 0.0 68.2577    
cufflinks 18.6794 0.0 49.429   Low
cufflinks 23.1838 0.0 60.7255    

0 Strain