Gene : Phvul.004G140900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11527:SF171 - ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN Genomic Order:  1436
Name:  ? Phvul.004G140900 Secondary Identifier:  ? PAC:37162311
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G140900 0.5kb upstream 0.5kb upstream 1419 true Chr04: 44061750-44063168 Phaseolus vulgaris
Phvul.004G140900 0.5kb upstream 0.5kb upstream 500 false Chr04: 44061750-44062249 Phaseolus vulgaris
Phvul.004G140900 0.5kb downstream 0.5kb downstream 1419 true Chr04: 44062250-44063668 Phaseolus vulgaris
Phvul.004G140900 0.5kb downstream 0.5kb downstream 500 false Chr04: 44063169-44063668 Phaseolus vulgaris
Phvul.004G140900 1.0kb upstream 1.0kb upstream 1919 true Chr04: 44061250-44063168 Phaseolus vulgaris
Phvul.004G140900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44061250-44062249 Phaseolus vulgaris
Phvul.004G140900 1.0kb downstream 1.0kb downstream 1919 true Chr04: 44062250-44064168 Phaseolus vulgaris
Phvul.004G140900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44063169-44064168 Phaseolus vulgaris
Phvul.004G140900 2.0kb upstream 2.0kb upstream 2919 true Chr04: 44060250-44063168 Phaseolus vulgaris
Phvul.004G140900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44060250-44062249 Phaseolus vulgaris
Phvul.004G140900 2.0kb downstream 2.0kb downstream 2919 true Chr04: 44062250-44065168 Phaseolus vulgaris
Phvul.004G140900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44063169-44065168 Phaseolus vulgaris
Phvul.004G140900 5.0kb upstream 5.0kb upstream 5919 true Chr04: 44057250-44063168 Phaseolus vulgaris
Phvul.004G140900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44057250-44062249 Phaseolus vulgaris
Phvul.004G140900 5.0kb downstream 5.0kb downstream 5919 true Chr04: 44062250-44068168 Phaseolus vulgaris
Phvul.004G140900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44063169-44068168 Phaseolus vulgaris
Phvul.004G140900 10.0kb upstream 10.0kb upstream 10919 true Chr04: 44052250-44063168 Phaseolus vulgaris
Phvul.004G140900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44052250-44062249 Phaseolus vulgaris
Phvul.004G140900 10.0kb downstream 10.0kb downstream 10919 true Chr04: 44062250-44073168 Phaseolus vulgaris
Phvul.004G140900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44063169-44073168 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312216 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11619 0.0 4.19159    
cufflinks 1.24454 0.0 4.633    
cufflinks 2.95995 0.0 10.1343    
cufflinks 2.52554 0.0 8.86917    
cufflinks 4.36117 0.0 14.4848   High
cufflinks 1.22137 0.0 4.54981    
cufflinks 2.52939 0.0 8.78032    
cufflinks 0.76014 0.0 2.92181    
cufflinks 0.936522 0.0 3.56094    
cufflinks 0.115294 0.0 0.528719 Low Low
cufflinks 4.85555 0.0 15.8322   High

0 Strain