Gene : Phvul.007G088000 P. vulgaris v2.1
Defline:  (1 of 15) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  890
Name:  ? Phvul.007G088000 Secondary Identifier:  ? PAC:37164612
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G088000 0.5kb upstream 0.5kb upstream 13187 true Chr07: 8993284-9006470 Phaseolus vulgaris
Phvul.007G088000 0.5kb upstream 0.5kb upstream 500 false Chr07: 8993284-8993783 Phaseolus vulgaris
Phvul.007G088000 0.5kb downstream 0.5kb downstream 13187 true Chr07: 8993784-9006970 Phaseolus vulgaris
Phvul.007G088000 0.5kb downstream 0.5kb downstream 500 false Chr07: 9006471-9006970 Phaseolus vulgaris
Phvul.007G088000 1.0kb upstream 1.0kb upstream 13687 true Chr07: 8992784-9006470 Phaseolus vulgaris
Phvul.007G088000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8992784-8993783 Phaseolus vulgaris
Phvul.007G088000 1.0kb downstream 1.0kb downstream 13687 true Chr07: 8993784-9007470 Phaseolus vulgaris
Phvul.007G088000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9006471-9007470 Phaseolus vulgaris
Phvul.007G088000 2.0kb upstream 2.0kb upstream 14687 true Chr07: 8991784-9006470 Phaseolus vulgaris
Phvul.007G088000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8991784-8993783 Phaseolus vulgaris
Phvul.007G088000 2.0kb downstream 2.0kb downstream 14687 true Chr07: 8993784-9008470 Phaseolus vulgaris
Phvul.007G088000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9006471-9008470 Phaseolus vulgaris
Phvul.007G088000 5.0kb upstream 5.0kb upstream 17687 true Chr07: 8988784-9006470 Phaseolus vulgaris
Phvul.007G088000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8988784-8993783 Phaseolus vulgaris
Phvul.007G088000 5.0kb downstream 5.0kb downstream 17687 true Chr07: 8993784-9011470 Phaseolus vulgaris
Phvul.007G088000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9006471-9011470 Phaseolus vulgaris
Phvul.007G088000 10.0kb upstream 10.0kb upstream 22687 true Chr07: 8983784-9006470 Phaseolus vulgaris
Phvul.007G088000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8983784-8993783 Phaseolus vulgaris
Phvul.007G088000 10.0kb downstream 10.0kb downstream 22687 true Chr07: 8993784-9016470 Phaseolus vulgaris
Phvul.007G088000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9006471-9016470 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305544 5265 Fabidae View MSA
124062603 5270 Rosid View MSA
123740841 5271 Pentapetalae View MSA
122789815 5272 Eudicot View MSA
122047946 5273 Angiosperm View MSA
121344073 5274 Embryophyte View MSA
123379968 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.46658 0.0 19.3445   Low
cufflinks 6.59661 0.0 29.417    
cufflinks 11.0289 0.0 50.2937    
cufflinks 4.08818 0.0 18.4585   Low
cufflinks 6.81688 0.0 24.7869    
cufflinks 12.2465 0.0 51.6943   High
cufflinks 11.2723 0.0 51.7473    
cufflinks 9.99239 0.0 42.9224    
cufflinks 9.91617 0.0 48.3265    
cufflinks 10.4915 0.0 42.3779    
cufflinks 8.15355 0.0 31.9015    

0 Strain