Gene : Phvul.004G141900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32258:SF3 - F11A17.4-RELATED Genomic Order:  1446
Name:  ? Phvul.004G141900 Secondary Identifier:  ? PAC:37162659
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G141900 0.5kb upstream 0.5kb upstream 4906 true Chr04: 44153758-44158663 Phaseolus vulgaris
Phvul.004G141900 0.5kb upstream 0.5kb upstream 500 false Chr04: 44158164-44158663 Phaseolus vulgaris
Phvul.004G141900 0.5kb downstream 0.5kb downstream 4906 true Chr04: 44153258-44158163 Phaseolus vulgaris
Phvul.004G141900 0.5kb downstream 0.5kb downstream 500 false Chr04: 44153258-44153757 Phaseolus vulgaris
Phvul.004G141900 1.0kb upstream 1.0kb upstream 5406 true Chr04: 44153758-44159163 Phaseolus vulgaris
Phvul.004G141900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44158164-44159163 Phaseolus vulgaris
Phvul.004G141900 1.0kb downstream 1.0kb downstream 5406 true Chr04: 44152758-44158163 Phaseolus vulgaris
Phvul.004G141900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44152758-44153757 Phaseolus vulgaris
Phvul.004G141900 2.0kb upstream 2.0kb upstream 6406 true Chr04: 44153758-44160163 Phaseolus vulgaris
Phvul.004G141900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44158164-44160163 Phaseolus vulgaris
Phvul.004G141900 2.0kb downstream 2.0kb downstream 6406 true Chr04: 44151758-44158163 Phaseolus vulgaris
Phvul.004G141900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44151758-44153757 Phaseolus vulgaris
Phvul.004G141900 5.0kb upstream 5.0kb upstream 9406 true Chr04: 44153758-44163163 Phaseolus vulgaris
Phvul.004G141900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44158164-44163163 Phaseolus vulgaris
Phvul.004G141900 5.0kb downstream 5.0kb downstream 9406 true Chr04: 44148758-44158163 Phaseolus vulgaris
Phvul.004G141900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44148758-44153757 Phaseolus vulgaris
Phvul.004G141900 10.0kb upstream 10.0kb upstream 14406 true Chr04: 44153758-44168163 Phaseolus vulgaris
Phvul.004G141900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44158164-44168163 Phaseolus vulgaris
Phvul.004G141900 10.0kb downstream 10.0kb downstream 14406 true Chr04: 44143758-44158163 Phaseolus vulgaris
Phvul.004G141900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44143758-44153757 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309357 5265 Fabidae View MSA
124069573 5270 Rosid View MSA
123741265 5271 Pentapetalae View MSA
122792073 5272 Eudicot View MSA
122045370 5273 Angiosperm View MSA
121310443 5274 Embryophyte View MSA
123347924 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4503 0.0 35.4956    
cufflinks 22.6826 0.0 71.8075   High
cufflinks 1.27429 0.0 4.7415   Low
cufflinks 15.5476 0.0 45.3253   High
cufflinks 5.19792 0.0 17.4474    
cufflinks 10.2839 0.0 31.7787    
cufflinks 2.4054 0.0 9.81136    
cufflinks 1.94935 0.0 8.23569   Low
cufflinks 1.72362 0.0 7.62329   Low
cufflinks 8.29081 0.0 25.256    
cufflinks 10.7146 0.0 36.408    

0 Strain