Gene : Phvul.007G073300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13107 - KARYOGAMY PROTEIN KAR4-RELATED Genomic Order:  739
Name:  ? Phvul.007G073300 Secondary Identifier:  ? PAC:37165043
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G073300 0.5kb upstream 0.5kb upstream 8890 true Chr07: 6831334-6840223 Phaseolus vulgaris
Phvul.007G073300 0.5kb upstream 0.5kb upstream 500 false Chr07: 6839724-6840223 Phaseolus vulgaris
Phvul.007G073300 0.5kb downstream 0.5kb downstream 8890 true Chr07: 6830834-6839723 Phaseolus vulgaris
Phvul.007G073300 0.5kb downstream 0.5kb downstream 500 false Chr07: 6830834-6831333 Phaseolus vulgaris
Phvul.007G073300 1.0kb upstream 1.0kb upstream 9390 true Chr07: 6831334-6840723 Phaseolus vulgaris
Phvul.007G073300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6839724-6840723 Phaseolus vulgaris
Phvul.007G073300 1.0kb downstream 1.0kb downstream 9390 true Chr07: 6830334-6839723 Phaseolus vulgaris
Phvul.007G073300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6830334-6831333 Phaseolus vulgaris
Phvul.007G073300 2.0kb upstream 2.0kb upstream 10390 true Chr07: 6831334-6841723 Phaseolus vulgaris
Phvul.007G073300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6839724-6841723 Phaseolus vulgaris
Phvul.007G073300 2.0kb downstream 2.0kb downstream 10390 true Chr07: 6829334-6839723 Phaseolus vulgaris
Phvul.007G073300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6829334-6831333 Phaseolus vulgaris
Phvul.007G073300 5.0kb upstream 5.0kb upstream 13390 true Chr07: 6831334-6844723 Phaseolus vulgaris
Phvul.007G073300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6839724-6844723 Phaseolus vulgaris
Phvul.007G073300 5.0kb downstream 5.0kb downstream 13390 true Chr07: 6826334-6839723 Phaseolus vulgaris
Phvul.007G073300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6826334-6831333 Phaseolus vulgaris
Phvul.007G073300 10.0kb upstream 10.0kb upstream 18390 true Chr07: 6831334-6849723 Phaseolus vulgaris
Phvul.007G073300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6839724-6849723 Phaseolus vulgaris
Phvul.007G073300 10.0kb downstream 10.0kb downstream 18390 true Chr07: 6821334-6839723 Phaseolus vulgaris
Phvul.007G073300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6821334-6831333 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301130 5265 Fabidae View MSA
124068937 5270 Rosid View MSA
123737308 5271 Pentapetalae View MSA
122789765 5272 Eudicot View MSA
122041791 5273 Angiosperm View MSA
121349708 5274 Embryophyte View MSA
123428450 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.96253 0.0 18.0043   Low
cufflinks 16.5148 0.0 43.9172    
cufflinks 18.3653 0.0 49.1619    
cufflinks 7.78722 0.0 20.1363   Low
cufflinks 20.1108 0.0 54.1076    
cufflinks 22.3897 0.0 61.1852    
cufflinks 23.0245 0.0 63.5133    
cufflinks 21.1383 0.0 57.6718    
cufflinks 24.4351 0.0 67.5968    
cufflinks 26.4985 0.0 73.3975    
cufflinks 17.0241 0.0 45.3806    

0 Strain