Gene : Phvul.007G073500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31636:SF4 - SCARECROW-LIKE PROTEIN 8 Genomic Order:  741
Name:  ? Phvul.007G073500 Secondary Identifier:  ? PAC:37166177
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G073500 0.5kb upstream 0.5kb upstream 2610 true Chr07: 6877770-6880379 Phaseolus vulgaris
Phvul.007G073500 0.5kb upstream 0.5kb upstream 500 false Chr07: 6879880-6880379 Phaseolus vulgaris
Phvul.007G073500 0.5kb downstream 0.5kb downstream 2610 true Chr07: 6877270-6879879 Phaseolus vulgaris
Phvul.007G073500 0.5kb downstream 0.5kb downstream 500 false Chr07: 6877270-6877769 Phaseolus vulgaris
Phvul.007G073500 1.0kb upstream 1.0kb upstream 3110 true Chr07: 6877770-6880879 Phaseolus vulgaris
Phvul.007G073500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6879880-6880879 Phaseolus vulgaris
Phvul.007G073500 1.0kb downstream 1.0kb downstream 3110 true Chr07: 6876770-6879879 Phaseolus vulgaris
Phvul.007G073500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6876770-6877769 Phaseolus vulgaris
Phvul.007G073500 2.0kb upstream 2.0kb upstream 4110 true Chr07: 6877770-6881879 Phaseolus vulgaris
Phvul.007G073500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6879880-6881879 Phaseolus vulgaris
Phvul.007G073500 2.0kb downstream 2.0kb downstream 4110 true Chr07: 6875770-6879879 Phaseolus vulgaris
Phvul.007G073500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6875770-6877769 Phaseolus vulgaris
Phvul.007G073500 5.0kb upstream 5.0kb upstream 7110 true Chr07: 6877770-6884879 Phaseolus vulgaris
Phvul.007G073500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6879880-6884879 Phaseolus vulgaris
Phvul.007G073500 5.0kb downstream 5.0kb downstream 7110 true Chr07: 6872770-6879879 Phaseolus vulgaris
Phvul.007G073500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6872770-6877769 Phaseolus vulgaris
Phvul.007G073500 10.0kb upstream 10.0kb upstream 12110 true Chr07: 6877770-6889879 Phaseolus vulgaris
Phvul.007G073500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6879880-6889879 Phaseolus vulgaris
Phvul.007G073500 10.0kb downstream 10.0kb downstream 12110 true Chr07: 6867770-6879879 Phaseolus vulgaris
Phvul.007G073500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6867770-6877769 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253858 5265 Fabidae View MSA
124062619 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.3417 0.0 63.249   High
cufflinks 11.3587 0.0 29.6265    
cufflinks 8.55676 0.0 22.8196   Low
cufflinks 21.1289 0.0 54.8291    
cufflinks 11.8221 0.0 30.7396    
cufflinks 9.6224 0.0 25.3162   Low
cufflinks 16.8697 0.0 43.6115    
cufflinks 19.88 0.0 51.4124    
cufflinks 22.2829 0.0 57.8961    
cufflinks 21.3205 0.0 55.2063    
cufflinks 14.8569 0.0 38.4204    

0 Strain