Gene : Phvul.007G072900 P. vulgaris v2.1
Defline:  (1 of 1) K14560 - U3 small nucleolar ribonucleoprotein protein IMP3 (IMP3) Genomic Order:  735
Name:  ? Phvul.007G072900 Secondary Identifier:  ? PAC:37167487
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G072900 0.5kb upstream 0.5kb upstream 3294 true Chr07: 6796375-6799668 Phaseolus vulgaris
Phvul.007G072900 0.5kb upstream 0.5kb upstream 500 false Chr07: 6796375-6796874 Phaseolus vulgaris
Phvul.007G072900 0.5kb downstream 0.5kb downstream 3294 true Chr07: 6796875-6800168 Phaseolus vulgaris
Phvul.007G072900 0.5kb downstream 0.5kb downstream 500 false Chr07: 6799669-6800168 Phaseolus vulgaris
Phvul.007G072900 1.0kb upstream 1.0kb upstream 3794 true Chr07: 6795875-6799668 Phaseolus vulgaris
Phvul.007G072900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6795875-6796874 Phaseolus vulgaris
Phvul.007G072900 1.0kb downstream 1.0kb downstream 3794 true Chr07: 6796875-6800668 Phaseolus vulgaris
Phvul.007G072900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6799669-6800668 Phaseolus vulgaris
Phvul.007G072900 2.0kb upstream 2.0kb upstream 4794 true Chr07: 6794875-6799668 Phaseolus vulgaris
Phvul.007G072900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6794875-6796874 Phaseolus vulgaris
Phvul.007G072900 2.0kb downstream 2.0kb downstream 4794 true Chr07: 6796875-6801668 Phaseolus vulgaris
Phvul.007G072900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6799669-6801668 Phaseolus vulgaris
Phvul.007G072900 5.0kb upstream 5.0kb upstream 7794 true Chr07: 6791875-6799668 Phaseolus vulgaris
Phvul.007G072900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6791875-6796874 Phaseolus vulgaris
Phvul.007G072900 5.0kb downstream 5.0kb downstream 7794 true Chr07: 6796875-6804668 Phaseolus vulgaris
Phvul.007G072900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6799669-6804668 Phaseolus vulgaris
Phvul.007G072900 10.0kb upstream 10.0kb upstream 12794 true Chr07: 6786875-6799668 Phaseolus vulgaris
Phvul.007G072900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6786875-6796874 Phaseolus vulgaris
Phvul.007G072900 10.0kb downstream 10.0kb downstream 12794 true Chr07: 6796875-6809668 Phaseolus vulgaris
Phvul.007G072900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6799669-6809668 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308325 5265 Fabidae View MSA
124067940 5270 Rosid View MSA
123740372 5271 Pentapetalae View MSA
122792450 5272 Eudicot View MSA
122044096 5273 Angiosperm View MSA
121345167 5274 Embryophyte View MSA
123424004 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4244 0.0 82.1133   High
cufflinks 23.7876 0.0 63.28    
cufflinks 14.5584 0.0 40.2837   Low
cufflinks 28.9974 0.0 76.3139   High
cufflinks 24.1431 0.0 64.4277    
cufflinks 17.0307 0.0 46.5339   Low
cufflinks 17.5303 0.0 47.7383    
cufflinks 19.5947 0.0 52.7241    
cufflinks 21.2373 0.0 57.044    
cufflinks 24.3067 0.0 64.6122    
cufflinks 24.4558 0.0 65.1143    

0 Strain