Gene : Phvul.004G127600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1301
Name:  ? Phvul.004G127600 Secondary Identifier:  ? PAC:37163677
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G127600 0.5kb upstream 0.5kb upstream 6033 true Chr04: 42355648-42361680 Phaseolus vulgaris
Phvul.004G127600 0.5kb upstream 0.5kb upstream 500 false Chr04: 42355648-42356147 Phaseolus vulgaris
Phvul.004G127600 0.5kb downstream 0.5kb downstream 6033 true Chr04: 42356148-42362180 Phaseolus vulgaris
Phvul.004G127600 0.5kb downstream 0.5kb downstream 500 false Chr04: 42361681-42362180 Phaseolus vulgaris
Phvul.004G127600 1.0kb upstream 1.0kb upstream 6533 true Chr04: 42355148-42361680 Phaseolus vulgaris
Phvul.004G127600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42355148-42356147 Phaseolus vulgaris
Phvul.004G127600 1.0kb downstream 1.0kb downstream 6533 true Chr04: 42356148-42362680 Phaseolus vulgaris
Phvul.004G127600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42361681-42362680 Phaseolus vulgaris
Phvul.004G127600 2.0kb upstream 2.0kb upstream 7533 true Chr04: 42354148-42361680 Phaseolus vulgaris
Phvul.004G127600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42354148-42356147 Phaseolus vulgaris
Phvul.004G127600 2.0kb downstream 2.0kb downstream 7533 true Chr04: 42356148-42363680 Phaseolus vulgaris
Phvul.004G127600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42361681-42363680 Phaseolus vulgaris
Phvul.004G127600 5.0kb upstream 5.0kb upstream 10533 true Chr04: 42351148-42361680 Phaseolus vulgaris
Phvul.004G127600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42351148-42356147 Phaseolus vulgaris
Phvul.004G127600 5.0kb downstream 5.0kb downstream 10533 true Chr04: 42356148-42366680 Phaseolus vulgaris
Phvul.004G127600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42361681-42366680 Phaseolus vulgaris
Phvul.004G127600 10.0kb upstream 10.0kb upstream 15533 true Chr04: 42346148-42361680 Phaseolus vulgaris
Phvul.004G127600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42346148-42356147 Phaseolus vulgaris
Phvul.004G127600 10.0kb downstream 10.0kb downstream 15533 true Chr04: 42356148-42371680 Phaseolus vulgaris
Phvul.004G127600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42361681-42371680 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311808 5265 Fabidae View MSA
124060994 5270 Rosid View MSA
123736699 5271 Pentapetalae View MSA
122786130 5272 Eudicot View MSA
122042661 5273 Angiosperm View MSA
121343944 5274 Embryophyte View MSA
123428038 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.7914 0.0 192.694 High High
cufflinks 41.5118 0.0 107.383 High  
cufflinks 20.4033 0.0 53.5046   Low
cufflinks 37.7806 0.0 97.6566 High  
cufflinks 23.6131 0.0 61.6528    
cufflinks 20.399 0.0 53.5604   Low
cufflinks 24.4543 0.0 63.6663    
cufflinks 28.3948 0.0 73.5468 High  
cufflinks 25.0253 0.0 65.1611    
cufflinks 37.4771 0.0 96.8752 High  
cufflinks 31.2135 0.0 80.8164    

0 Strain