Gene : Phvul.007G078700 P. vulgaris v2.1
Defline:  (1 of 1) K14317 - nuclear pore complex protein Nup214 (NUP214, CAN) Genomic Order:  795
Name:  ? Phvul.007G078700 Secondary Identifier:  ? PAC:37165834
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G078700 0.5kb upstream 0.5kb upstream 24361 true Chr07: 7597006-7621366 Phaseolus vulgaris
Phvul.007G078700 0.5kb upstream 0.5kb upstream 500 false Chr07: 7620867-7621366 Phaseolus vulgaris
Phvul.007G078700 0.5kb downstream 0.5kb downstream 24361 true Chr07: 7596506-7620866 Phaseolus vulgaris
Phvul.007G078700 0.5kb downstream 0.5kb downstream 500 false Chr07: 7596506-7597005 Phaseolus vulgaris
Phvul.007G078700 1.0kb upstream 1.0kb upstream 24861 true Chr07: 7597006-7621866 Phaseolus vulgaris
Phvul.007G078700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7620867-7621866 Phaseolus vulgaris
Phvul.007G078700 1.0kb downstream 1.0kb downstream 24861 true Chr07: 7596006-7620866 Phaseolus vulgaris
Phvul.007G078700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7596006-7597005 Phaseolus vulgaris
Phvul.007G078700 2.0kb upstream 2.0kb upstream 25861 true Chr07: 7597006-7622866 Phaseolus vulgaris
Phvul.007G078700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7620867-7622866 Phaseolus vulgaris
Phvul.007G078700 2.0kb downstream 2.0kb downstream 25861 true Chr07: 7595006-7620866 Phaseolus vulgaris
Phvul.007G078700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7595006-7597005 Phaseolus vulgaris
Phvul.007G078700 5.0kb upstream 5.0kb upstream 28861 true Chr07: 7597006-7625866 Phaseolus vulgaris
Phvul.007G078700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7620867-7625866 Phaseolus vulgaris
Phvul.007G078700 5.0kb downstream 5.0kb downstream 28861 true Chr07: 7592006-7620866 Phaseolus vulgaris
Phvul.007G078700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7592006-7597005 Phaseolus vulgaris
Phvul.007G078700 10.0kb upstream 10.0kb upstream 33861 true Chr07: 7597006-7630866 Phaseolus vulgaris
Phvul.007G078700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7620867-7630866 Phaseolus vulgaris
Phvul.007G078700 10.0kb downstream 10.0kb downstream 33861 true Chr07: 7587006-7620866 Phaseolus vulgaris
Phvul.007G078700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7587006-7597005 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301672 5265 Fabidae View MSA
124067866 5270 Rosid View MSA
123739810 5271 Pentapetalae View MSA
122786045 5272 Eudicot View MSA
122042091 5273 Angiosperm View MSA
121347011 5274 Embryophyte View MSA
123424066 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.47087 0.0 5.12188   Low
cufflinks 3.43514 0.0 10.3525    
cufflinks 6.34236 0.0 17.8296    
cufflinks 2.05992 0.0 6.77448   Low
cufflinks 5.83947 0.0 16.5445    
cufflinks 5.91394 0.0 16.6877    
cufflinks 5.33106 0.0 17.3665    
cufflinks 4.6197 0.0 15.1877    
cufflinks 5.98487 0.0 19.3462    
cufflinks 6.13452 0.0 19.7945    
cufflinks 3.68672 0.0 11.0582    

0 Strain