Gene : Phvul.004G130900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22601:SF23 - OLIGOPEPTIDE TRANSPORTER 2 Genomic Order:  1334
Name:  ? Phvul.004G130900 Secondary Identifier:  ? PAC:37162229
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G130900 0.5kb upstream 0.5kb upstream 1524 true Chr04: 42862733-42864256 Phaseolus vulgaris
Phvul.004G130900 0.5kb upstream 0.5kb upstream 500 false Chr04: 42862733-42863232 Phaseolus vulgaris
Phvul.004G130900 0.5kb downstream 0.5kb downstream 1524 true Chr04: 42863233-42864756 Phaseolus vulgaris
Phvul.004G130900 0.5kb downstream 0.5kb downstream 500 false Chr04: 42864257-42864756 Phaseolus vulgaris
Phvul.004G130900 1.0kb upstream 1.0kb upstream 2024 true Chr04: 42862233-42864256 Phaseolus vulgaris
Phvul.004G130900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42862233-42863232 Phaseolus vulgaris
Phvul.004G130900 1.0kb downstream 1.0kb downstream 2024 true Chr04: 42863233-42865256 Phaseolus vulgaris
Phvul.004G130900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42864257-42865256 Phaseolus vulgaris
Phvul.004G130900 2.0kb upstream 2.0kb upstream 3024 true Chr04: 42861233-42864256 Phaseolus vulgaris
Phvul.004G130900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42861233-42863232 Phaseolus vulgaris
Phvul.004G130900 2.0kb downstream 2.0kb downstream 3024 true Chr04: 42863233-42866256 Phaseolus vulgaris
Phvul.004G130900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42864257-42866256 Phaseolus vulgaris
Phvul.004G130900 5.0kb upstream 5.0kb upstream 6024 true Chr04: 42858233-42864256 Phaseolus vulgaris
Phvul.004G130900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42858233-42863232 Phaseolus vulgaris
Phvul.004G130900 5.0kb downstream 5.0kb downstream 6024 true Chr04: 42863233-42869256 Phaseolus vulgaris
Phvul.004G130900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42864257-42869256 Phaseolus vulgaris
Phvul.004G130900 10.0kb upstream 10.0kb upstream 11024 true Chr04: 42853233-42864256 Phaseolus vulgaris
Phvul.004G130900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42853233-42863232 Phaseolus vulgaris
Phvul.004G130900 10.0kb downstream 10.0kb downstream 11024 true Chr04: 42863233-42874256 Phaseolus vulgaris
Phvul.004G130900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42864257-42874256 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251688 5265 Fabidae Singleton cluster - no MSA
124040455 5270 Rosid View MSA
123753385 5271 Pentapetalae View MSA
122775084 5272 Eudicot View MSA
122048863 5273 Angiosperm View MSA
121311143 5274 Embryophyte View MSA
123348480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain