Gene : Phvul.007G081500 P. vulgaris v2.1
Defline:  (1 of 197) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  823
Name:  ? Phvul.007G081500 Secondary Identifier:  ? PAC:37164106
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G081500 0.5kb upstream 0.5kb upstream 2329 true Chr07: 8054036-8056364 Phaseolus vulgaris
Phvul.007G081500 0.5kb upstream 0.5kb upstream 500 false Chr07: 8055865-8056364 Phaseolus vulgaris
Phvul.007G081500 0.5kb downstream 0.5kb downstream 2329 true Chr07: 8053536-8055864 Phaseolus vulgaris
Phvul.007G081500 0.5kb downstream 0.5kb downstream 500 false Chr07: 8053536-8054035 Phaseolus vulgaris
Phvul.007G081500 1.0kb upstream 1.0kb upstream 2829 true Chr07: 8054036-8056864 Phaseolus vulgaris
Phvul.007G081500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8055865-8056864 Phaseolus vulgaris
Phvul.007G081500 1.0kb downstream 1.0kb downstream 2829 true Chr07: 8053036-8055864 Phaseolus vulgaris
Phvul.007G081500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8053036-8054035 Phaseolus vulgaris
Phvul.007G081500 2.0kb upstream 2.0kb upstream 3829 true Chr07: 8054036-8057864 Phaseolus vulgaris
Phvul.007G081500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8055865-8057864 Phaseolus vulgaris
Phvul.007G081500 2.0kb downstream 2.0kb downstream 3829 true Chr07: 8052036-8055864 Phaseolus vulgaris
Phvul.007G081500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8052036-8054035 Phaseolus vulgaris
Phvul.007G081500 5.0kb upstream 5.0kb upstream 6829 true Chr07: 8054036-8060864 Phaseolus vulgaris
Phvul.007G081500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8055865-8060864 Phaseolus vulgaris
Phvul.007G081500 5.0kb downstream 5.0kb downstream 6829 true Chr07: 8049036-8055864 Phaseolus vulgaris
Phvul.007G081500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8049036-8054035 Phaseolus vulgaris
Phvul.007G081500 10.0kb upstream 10.0kb upstream 11829 true Chr07: 8054036-8065864 Phaseolus vulgaris
Phvul.007G081500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8055865-8065864 Phaseolus vulgaris
Phvul.007G081500 10.0kb downstream 10.0kb downstream 11829 true Chr07: 8044036-8055864 Phaseolus vulgaris
Phvul.007G081500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8044036-8054035 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314444 5265 Fabidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.374197 0.0 1.40521 Low  
cufflinks 0.821914 0.0 2.86814   High
cufflinks 0.183451 0.0 0.728103 Low Low
cufflinks 0.639375 0.0 2.30917   High
cufflinks 0.246501 0.0 0.960525 Low  
cufflinks 0.295613 0.0 1.13076 Low  
cufflinks 0.216814 0.0 0.84975 Low  
cufflinks 0.446265 0.0 1.648 Low  
cufflinks 0.151351 0.0 0.610852 Low Low
cufflinks 0.546064 0.0 1.98851    
cufflinks 0.21749 0.0 0.854352 Low  

0 Strain