Gene : Phvul.004G133900 P. vulgaris v2.1
Defline:  (1 of 3) PF00228 - Bowman-Birk serine protease inhibitor family (Bowman-Birk_leg) Genomic Order:  1364
Name:  ? Phvul.004G133900 Secondary Identifier:  ? PAC:37161682
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G133900 0.5kb upstream 0.5kb upstream 1085 true Chr04: 43243524-43244608 Phaseolus vulgaris
Phvul.004G133900 0.5kb upstream 0.5kb upstream 500 false Chr04: 43244109-43244608 Phaseolus vulgaris
Phvul.004G133900 0.5kb downstream 0.5kb downstream 1085 true Chr04: 43243024-43244108 Phaseolus vulgaris
Phvul.004G133900 0.5kb downstream 0.5kb downstream 500 false Chr04: 43243024-43243523 Phaseolus vulgaris
Phvul.004G133900 1.0kb upstream 1.0kb upstream 1585 true Chr04: 43243524-43245108 Phaseolus vulgaris
Phvul.004G133900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43244109-43245108 Phaseolus vulgaris
Phvul.004G133900 1.0kb downstream 1.0kb downstream 1585 true Chr04: 43242524-43244108 Phaseolus vulgaris
Phvul.004G133900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43242524-43243523 Phaseolus vulgaris
Phvul.004G133900 2.0kb upstream 2.0kb upstream 2585 true Chr04: 43243524-43246108 Phaseolus vulgaris
Phvul.004G133900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43244109-43246108 Phaseolus vulgaris
Phvul.004G133900 2.0kb downstream 2.0kb downstream 2585 true Chr04: 43241524-43244108 Phaseolus vulgaris
Phvul.004G133900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43241524-43243523 Phaseolus vulgaris
Phvul.004G133900 5.0kb upstream 5.0kb upstream 5585 true Chr04: 43243524-43249108 Phaseolus vulgaris
Phvul.004G133900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43244109-43249108 Phaseolus vulgaris
Phvul.004G133900 5.0kb downstream 5.0kb downstream 5585 true Chr04: 43238524-43244108 Phaseolus vulgaris
Phvul.004G133900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43238524-43243523 Phaseolus vulgaris
Phvul.004G133900 10.0kb upstream 10.0kb upstream 10585 true Chr04: 43243524-43254108 Phaseolus vulgaris
Phvul.004G133900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43244109-43254108 Phaseolus vulgaris
Phvul.004G133900 10.0kb downstream 10.0kb downstream 10585 true Chr04: 43233524-43244108 Phaseolus vulgaris
Phvul.004G133900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43233524-43243523 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028215 5273 Angiosperm View MSA
122298549 5265 Fabidae View MSA
124036514 5270 Rosid View MSA
123609843 5271 Pentapetalae View MSA
122796054 5272 Eudicot View MSA
121297736 5274 Embryophyte View MSA
123335762 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558164 0.0 2.31532    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.629737 0.0 2.58094    
cufflinks 0.322871 0.0 1.40012 Low  
cufflinks 0.485113 0.0 2.04594 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.204827 0.0 0.932575 Low  
cufflinks 0.0767167 0.0 0.388435 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.98089 0.0 3.8943   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain