Gene : Phvul.004G134100 P. vulgaris v2.1
Defline:  (1 of 3) PF00228 - Bowman-Birk serine protease inhibitor family (Bowman-Birk_leg) Genomic Order:  1366
Name:  ? Phvul.004G134100 Secondary Identifier:  ? PAC:37162919
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G134100 0.5kb upstream 0.5kb upstream 1002 true Chr04: 43252672-43253673 Phaseolus vulgaris
Phvul.004G134100 0.5kb upstream 0.5kb upstream 500 false Chr04: 43252672-43253171 Phaseolus vulgaris
Phvul.004G134100 0.5kb downstream 0.5kb downstream 1002 true Chr04: 43253172-43254173 Phaseolus vulgaris
Phvul.004G134100 0.5kb downstream 0.5kb downstream 500 false Chr04: 43253674-43254173 Phaseolus vulgaris
Phvul.004G134100 1.0kb upstream 1.0kb upstream 1502 true Chr04: 43252172-43253673 Phaseolus vulgaris
Phvul.004G134100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43252172-43253171 Phaseolus vulgaris
Phvul.004G134100 1.0kb downstream 1.0kb downstream 1502 true Chr04: 43253172-43254673 Phaseolus vulgaris
Phvul.004G134100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43253674-43254673 Phaseolus vulgaris
Phvul.004G134100 2.0kb upstream 2.0kb upstream 2502 true Chr04: 43251172-43253673 Phaseolus vulgaris
Phvul.004G134100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43251172-43253171 Phaseolus vulgaris
Phvul.004G134100 2.0kb downstream 2.0kb downstream 2502 true Chr04: 43253172-43255673 Phaseolus vulgaris
Phvul.004G134100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43253674-43255673 Phaseolus vulgaris
Phvul.004G134100 5.0kb upstream 5.0kb upstream 5502 true Chr04: 43248172-43253673 Phaseolus vulgaris
Phvul.004G134100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43248172-43253171 Phaseolus vulgaris
Phvul.004G134100 5.0kb downstream 5.0kb downstream 5502 true Chr04: 43253172-43258673 Phaseolus vulgaris
Phvul.004G134100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43253674-43258673 Phaseolus vulgaris
Phvul.004G134100 10.0kb upstream 10.0kb upstream 10502 true Chr04: 43243172-43253673 Phaseolus vulgaris
Phvul.004G134100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43243172-43253171 Phaseolus vulgaris
Phvul.004G134100 10.0kb downstream 10.0kb downstream 10502 true Chr04: 43253172-43263673 Phaseolus vulgaris
Phvul.004G134100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43253674-43263673 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028215 5273 Angiosperm View MSA
122298549 5265 Fabidae View MSA
124036514 5270 Rosid View MSA
123609843 5271 Pentapetalae View MSA
122796054 5272 Eudicot View MSA
121297736 5274 Embryophyte View MSA
123335762 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.319018 0.0 1.41017 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.178244 0.0 0.832525 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.06873 0.0 4.26803   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.118447 0.0 0.580098 Low  
cufflinks 0.0899961 0.0 0.455672 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.183078 0.0 0.861244 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain