Gene : Phvul.004G134500 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1370
Name:  ? Phvul.004G134500 Secondary Identifier:  ? PAC:37163356
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G134500 0.5kb upstream 0.5kb upstream 2735 true Chr04: 43346874-43349608 Phaseolus vulgaris
Phvul.004G134500 0.5kb upstream 0.5kb upstream 500 false Chr04: 43346874-43347373 Phaseolus vulgaris
Phvul.004G134500 0.5kb downstream 0.5kb downstream 2735 true Chr04: 43347374-43350108 Phaseolus vulgaris
Phvul.004G134500 0.5kb downstream 0.5kb downstream 500 false Chr04: 43349609-43350108 Phaseolus vulgaris
Phvul.004G134500 1.0kb upstream 1.0kb upstream 3235 true Chr04: 43346374-43349608 Phaseolus vulgaris
Phvul.004G134500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43346374-43347373 Phaseolus vulgaris
Phvul.004G134500 1.0kb downstream 1.0kb downstream 3235 true Chr04: 43347374-43350608 Phaseolus vulgaris
Phvul.004G134500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43349609-43350608 Phaseolus vulgaris
Phvul.004G134500 2.0kb upstream 2.0kb upstream 4235 true Chr04: 43345374-43349608 Phaseolus vulgaris
Phvul.004G134500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43345374-43347373 Phaseolus vulgaris
Phvul.004G134500 2.0kb downstream 2.0kb downstream 4235 true Chr04: 43347374-43351608 Phaseolus vulgaris
Phvul.004G134500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43349609-43351608 Phaseolus vulgaris
Phvul.004G134500 5.0kb upstream 5.0kb upstream 7235 true Chr04: 43342374-43349608 Phaseolus vulgaris
Phvul.004G134500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43342374-43347373 Phaseolus vulgaris
Phvul.004G134500 5.0kb downstream 5.0kb downstream 7235 true Chr04: 43347374-43354608 Phaseolus vulgaris
Phvul.004G134500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43349609-43354608 Phaseolus vulgaris
Phvul.004G134500 10.0kb upstream 10.0kb upstream 12235 true Chr04: 43337374-43349608 Phaseolus vulgaris
Phvul.004G134500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43337374-43347373 Phaseolus vulgaris
Phvul.004G134500 10.0kb downstream 10.0kb downstream 12235 true Chr04: 43347374-43359608 Phaseolus vulgaris
Phvul.004G134500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43349609-43359608 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254499 5265 Fabidae View MSA
124051242 5270 Rosid View MSA
123753438 5271 Pentapetalae View MSA
122775106 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.442983 0.0 1.67203    
cufflinks 0.041011 0.0 0.190119 Low Low
cufflinks 35.8679 0.0 92.8565   High
cufflinks 1.53462 0.0 5.13476    
cufflinks 1.42019 0.0 4.83015    
cufflinks 3.87602 0.0 11.6233    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.436669 0.0 1.64888    
cufflinks 0.295533 0.0 1.155 Low  

0 Strain