Gene : Phvul.004G134600 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1371
Name:  ? Phvul.004G134600 Secondary Identifier:  ? PAC:37163822
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G134600 0.5kb upstream 0.5kb upstream 2244 true Chr04: 43369955-43372198 Phaseolus vulgaris
Phvul.004G134600 0.5kb upstream 0.5kb upstream 500 false Chr04: 43369955-43370454 Phaseolus vulgaris
Phvul.004G134600 0.5kb downstream 0.5kb downstream 2244 true Chr04: 43370455-43372698 Phaseolus vulgaris
Phvul.004G134600 0.5kb downstream 0.5kb downstream 500 false Chr04: 43372199-43372698 Phaseolus vulgaris
Phvul.004G134600 1.0kb upstream 1.0kb upstream 2744 true Chr04: 43369455-43372198 Phaseolus vulgaris
Phvul.004G134600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43369455-43370454 Phaseolus vulgaris
Phvul.004G134600 1.0kb downstream 1.0kb downstream 2744 true Chr04: 43370455-43373198 Phaseolus vulgaris
Phvul.004G134600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43372199-43373198 Phaseolus vulgaris
Phvul.004G134600 2.0kb upstream 2.0kb upstream 3744 true Chr04: 43368455-43372198 Phaseolus vulgaris
Phvul.004G134600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43368455-43370454 Phaseolus vulgaris
Phvul.004G134600 2.0kb downstream 2.0kb downstream 3744 true Chr04: 43370455-43374198 Phaseolus vulgaris
Phvul.004G134600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43372199-43374198 Phaseolus vulgaris
Phvul.004G134600 5.0kb upstream 5.0kb upstream 6744 true Chr04: 43365455-43372198 Phaseolus vulgaris
Phvul.004G134600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43365455-43370454 Phaseolus vulgaris
Phvul.004G134600 5.0kb downstream 5.0kb downstream 6744 true Chr04: 43370455-43377198 Phaseolus vulgaris
Phvul.004G134600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43372199-43377198 Phaseolus vulgaris
Phvul.004G134600 10.0kb upstream 10.0kb upstream 11744 true Chr04: 43360455-43372198 Phaseolus vulgaris
Phvul.004G134600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43360455-43370454 Phaseolus vulgaris
Phvul.004G134600 10.0kb downstream 10.0kb downstream 11744 true Chr04: 43370455-43382198 Phaseolus vulgaris
Phvul.004G134600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43372199-43382198 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254499 5265 Fabidae View MSA
124051242 5270 Rosid View MSA
123753438 5271 Pentapetalae View MSA
122775106 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00754028 0.0 0.0438471 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.580904 0.0 2.18005   High
cufflinks 0.0939341 0.0 0.411133 Low  
cufflinks 0.0133868 0.0 0.0731033 Low  
cufflinks 0.100973 0.0 0.437972 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00210856 0.0 0.0188597 Low Low
cufflinks 0.00534104 0.0 0.0328178 Low  

0 Strain