Gene : Phvul.004G116050 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12203//PTHR12203:SF32 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED Genomic Order:  1184
Name:  ? Phvul.004G116050 Secondary Identifier:  ? PAC:37162974
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G116050 0.5kb upstream 0.5kb upstream 19972 true Chr04: 39977588-39997559 Phaseolus vulgaris
Phvul.004G116050 0.5kb upstream 0.5kb upstream 500 false Chr04: 39997060-39997559 Phaseolus vulgaris
Phvul.004G116050 0.5kb downstream 0.5kb downstream 19972 true Chr04: 39977088-39997059 Phaseolus vulgaris
Phvul.004G116050 0.5kb downstream 0.5kb downstream 500 false Chr04: 39977088-39977587 Phaseolus vulgaris
Phvul.004G116050 1.0kb upstream 1.0kb upstream 20472 true Chr04: 39977588-39998059 Phaseolus vulgaris
Phvul.004G116050 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39997060-39998059 Phaseolus vulgaris
Phvul.004G116050 1.0kb downstream 1.0kb downstream 20472 true Chr04: 39976588-39997059 Phaseolus vulgaris
Phvul.004G116050 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39976588-39977587 Phaseolus vulgaris
Phvul.004G116050 2.0kb upstream 2.0kb upstream 21472 true Chr04: 39977588-39999059 Phaseolus vulgaris
Phvul.004G116050 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39997060-39999059 Phaseolus vulgaris
Phvul.004G116050 2.0kb downstream 2.0kb downstream 21472 true Chr04: 39975588-39997059 Phaseolus vulgaris
Phvul.004G116050 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39975588-39977587 Phaseolus vulgaris
Phvul.004G116050 5.0kb upstream 5.0kb upstream 24472 true Chr04: 39977588-40002059 Phaseolus vulgaris
Phvul.004G116050 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39997060-40002059 Phaseolus vulgaris
Phvul.004G116050 5.0kb downstream 5.0kb downstream 24472 true Chr04: 39972588-39997059 Phaseolus vulgaris
Phvul.004G116050 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39972588-39977587 Phaseolus vulgaris
Phvul.004G116050 10.0kb upstream 10.0kb upstream 29472 true Chr04: 39977588-40007059 Phaseolus vulgaris
Phvul.004G116050 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39997060-40007059 Phaseolus vulgaris
Phvul.004G116050 10.0kb downstream 10.0kb downstream 29472 true Chr04: 39967588-39997059 Phaseolus vulgaris
Phvul.004G116050 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39967588-39977587 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309686 5265 Fabidae View MSA
124071694 5270 Rosid View MSA
123749767 5271 Pentapetalae View MSA
122786856 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61636 0.0 7.06095    
cufflinks 3.07127 0.0 11.2422    
cufflinks 1.97181 0.0 6.39438    
cufflinks 3.4473 0.0 12.439    
cufflinks 3.66705 0.0 13.0156    
cufflinks 3.3613 0.0 11.7422    
cufflinks 2.3108 0.0 9.13939    
cufflinks 21.7138 0.0 61.8457   High
cufflinks 1.30189 0.0 4.5439   Low
cufflinks 13.231 0.0 42.95   High
cufflinks 2.80325 0.0 10.6895    

0 Strain