Gene : Phvul.007G066520 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  668
Name:  ? Phvul.007G066520 Secondary Identifier:  ? PAC:37164108
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G066520 0.5kb upstream 0.5kb upstream 2080 true Chr07: 6023622-6025701 Phaseolus vulgaris
Phvul.007G066520 0.5kb upstream 0.5kb upstream 500 false Chr07: 6025202-6025701 Phaseolus vulgaris
Phvul.007G066520 0.5kb downstream 0.5kb downstream 2080 true Chr07: 6023122-6025201 Phaseolus vulgaris
Phvul.007G066520 0.5kb downstream 0.5kb downstream 500 false Chr07: 6023122-6023621 Phaseolus vulgaris
Phvul.007G066520 1.0kb upstream 1.0kb upstream 2580 true Chr07: 6023622-6026201 Phaseolus vulgaris
Phvul.007G066520 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6025202-6026201 Phaseolus vulgaris
Phvul.007G066520 1.0kb downstream 1.0kb downstream 2580 true Chr07: 6022622-6025201 Phaseolus vulgaris
Phvul.007G066520 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6022622-6023621 Phaseolus vulgaris
Phvul.007G066520 2.0kb upstream 2.0kb upstream 3580 true Chr07: 6023622-6027201 Phaseolus vulgaris
Phvul.007G066520 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6025202-6027201 Phaseolus vulgaris
Phvul.007G066520 2.0kb downstream 2.0kb downstream 3580 true Chr07: 6021622-6025201 Phaseolus vulgaris
Phvul.007G066520 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6021622-6023621 Phaseolus vulgaris
Phvul.007G066520 5.0kb upstream 5.0kb upstream 6580 true Chr07: 6023622-6030201 Phaseolus vulgaris
Phvul.007G066520 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6025202-6030201 Phaseolus vulgaris
Phvul.007G066520 5.0kb downstream 5.0kb downstream 6580 true Chr07: 6018622-6025201 Phaseolus vulgaris
Phvul.007G066520 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6018622-6023621 Phaseolus vulgaris
Phvul.007G066520 10.0kb upstream 10.0kb upstream 11580 true Chr07: 6023622-6035201 Phaseolus vulgaris
Phvul.007G066520 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6025202-6035201 Phaseolus vulgaris
Phvul.007G066520 10.0kb downstream 10.0kb downstream 11580 true Chr07: 6013622-6025201 Phaseolus vulgaris
Phvul.007G066520 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6013622-6023621 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303157 5265 Fabidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.534164 0.0 1.99084    
cufflinks 0.20233 0.0 0.81668 Low Low
cufflinks 1.32343 0.0 4.53121    
cufflinks 1.20225 0.0 4.15308    
cufflinks 5.39106 0.0 15.6799   High
cufflinks 5.60666 0.0 16.2963   High
cufflinks 1.51639 0.0 5.09423    
cufflinks 0.31238 0.0 1.21697 Low  
cufflinks 0.400287 0.0 1.53041 Low  
cufflinks 0.198795 0.0 0.803174 Low Low
cufflinks 11.9813 0.0 32.4135   High

0 Strain