Gene : Phvul.007G066600 P. vulgaris v2.1
Defline:  (1 of 1) K16908 - chloroplast NAD(P)H dehydrogenase (CRR1) Genomic Order:  672
Name:  ? Phvul.007G066600 Secondary Identifier:  ? PAC:37164274
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5097 Phaseolus vulgaris pathologic  
Pvulgaris PWY-724 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G066600 0.5kb upstream 0.5kb upstream 4033 true Chr07: 6124211-6128243 Phaseolus vulgaris
Phvul.007G066600 0.5kb upstream 0.5kb upstream 500 false Chr07: 6124211-6124710 Phaseolus vulgaris
Phvul.007G066600 0.5kb downstream 0.5kb downstream 4033 true Chr07: 6124711-6128743 Phaseolus vulgaris
Phvul.007G066600 0.5kb downstream 0.5kb downstream 500 false Chr07: 6128244-6128743 Phaseolus vulgaris
Phvul.007G066600 1.0kb upstream 1.0kb upstream 4533 true Chr07: 6123711-6128243 Phaseolus vulgaris
Phvul.007G066600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6123711-6124710 Phaseolus vulgaris
Phvul.007G066600 1.0kb downstream 1.0kb downstream 4533 true Chr07: 6124711-6129243 Phaseolus vulgaris
Phvul.007G066600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6128244-6129243 Phaseolus vulgaris
Phvul.007G066600 2.0kb upstream 2.0kb upstream 5533 true Chr07: 6122711-6128243 Phaseolus vulgaris
Phvul.007G066600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6122711-6124710 Phaseolus vulgaris
Phvul.007G066600 2.0kb downstream 2.0kb downstream 5533 true Chr07: 6124711-6130243 Phaseolus vulgaris
Phvul.007G066600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6128244-6130243 Phaseolus vulgaris
Phvul.007G066600 5.0kb upstream 5.0kb upstream 8533 true Chr07: 6119711-6128243 Phaseolus vulgaris
Phvul.007G066600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6119711-6124710 Phaseolus vulgaris
Phvul.007G066600 5.0kb downstream 5.0kb downstream 8533 true Chr07: 6124711-6133243 Phaseolus vulgaris
Phvul.007G066600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6128244-6133243 Phaseolus vulgaris
Phvul.007G066600 10.0kb upstream 10.0kb upstream 13533 true Chr07: 6114711-6128243 Phaseolus vulgaris
Phvul.007G066600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6114711-6124710 Phaseolus vulgaris
Phvul.007G066600 10.0kb downstream 10.0kb downstream 13533 true Chr07: 6124711-6138243 Phaseolus vulgaris
Phvul.007G066600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6128244-6138243 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302709 5265 Fabidae View MSA
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558305 0.0 2.08082   Low
cufflinks 3.31547 0.0 10.2463    
cufflinks 49.3359 0.0 128.488 High High
cufflinks 0.931981 0.0 3.33298    
cufflinks 2.07009 0.0 6.80705    
cufflinks 21.3989 0.0 55.8099   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.9062 0.0 6.28086    
cufflinks 1.64761 0.0 5.54749    

0 Strain