Gene : Phvul.007G066800 P. vulgaris v2.1
Defline:  (1 of 2) K03014 - DNA-directed RNA polymerases I, II, and III subunit RPABC2 (RPB6, POLR2F) Genomic Order:  674
Name:  ? Phvul.007G066800 Secondary Identifier:  ? PAC:37165887
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G066800 0.5kb upstream 0.5kb upstream 2697 true Chr07: 6144153-6146849 Phaseolus vulgaris
Phvul.007G066800 0.5kb upstream 0.5kb upstream 500 false Chr07: 6146350-6146849 Phaseolus vulgaris
Phvul.007G066800 0.5kb downstream 0.5kb downstream 2697 true Chr07: 6143653-6146349 Phaseolus vulgaris
Phvul.007G066800 0.5kb downstream 0.5kb downstream 500 false Chr07: 6143653-6144152 Phaseolus vulgaris
Phvul.007G066800 1.0kb upstream 1.0kb upstream 3197 true Chr07: 6144153-6147349 Phaseolus vulgaris
Phvul.007G066800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6146350-6147349 Phaseolus vulgaris
Phvul.007G066800 1.0kb downstream 1.0kb downstream 3197 true Chr07: 6143153-6146349 Phaseolus vulgaris
Phvul.007G066800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6143153-6144152 Phaseolus vulgaris
Phvul.007G066800 2.0kb upstream 2.0kb upstream 4197 true Chr07: 6144153-6148349 Phaseolus vulgaris
Phvul.007G066800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6146350-6148349 Phaseolus vulgaris
Phvul.007G066800 2.0kb downstream 2.0kb downstream 4197 true Chr07: 6142153-6146349 Phaseolus vulgaris
Phvul.007G066800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6142153-6144152 Phaseolus vulgaris
Phvul.007G066800 5.0kb upstream 5.0kb upstream 7197 true Chr07: 6144153-6151349 Phaseolus vulgaris
Phvul.007G066800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6146350-6151349 Phaseolus vulgaris
Phvul.007G066800 5.0kb downstream 5.0kb downstream 7197 true Chr07: 6139153-6146349 Phaseolus vulgaris
Phvul.007G066800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6139153-6144152 Phaseolus vulgaris
Phvul.007G066800 10.0kb upstream 10.0kb upstream 12197 true Chr07: 6144153-6156349 Phaseolus vulgaris
Phvul.007G066800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6146350-6156349 Phaseolus vulgaris
Phvul.007G066800 10.0kb downstream 10.0kb downstream 12197 true Chr07: 6134153-6146349 Phaseolus vulgaris
Phvul.007G066800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6134153-6144152 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312605 5265 Fabidae View MSA
124071266 5270 Rosid View MSA
123737177 5271 Pentapetalae View MSA
122793068 5272 Eudicot View MSA
122041807 5273 Angiosperm View MSA
121346108 5274 Embryophyte View MSA
123427545 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3286 0.0 40.5786   High
cufflinks 17.7684 0.0 49.291   High
cufflinks 4.17252 0.0 13.5771   Low
cufflinks 11.46 0.0 33.3054    
cufflinks 7.30985 0.0 22.4427    
cufflinks 3.35155 0.0 11.1419   Low
cufflinks 5.29989 0.0 16.6621    
cufflinks 6.92247 0.0 21.15    
cufflinks 3.86025 0.0 12.5861   Low
cufflinks 10.2898 0.0 30.269    
cufflinks 10.3457 0.0 30.3369    

0 Strain