Gene : Phvul.007G070001 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22814//PTHR22814:SF52 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  706
Name:  ? Phvul.007G070001 Secondary Identifier:  ? PAC:37164736
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G070001 0.5kb upstream 0.5kb upstream 1448 true Chr07: 6463388-6464835 Phaseolus vulgaris
Phvul.007G070001 0.5kb upstream 0.5kb upstream 500 false Chr07: 6464336-6464835 Phaseolus vulgaris
Phvul.007G070001 0.5kb downstream 0.5kb downstream 1448 true Chr07: 6462888-6464335 Phaseolus vulgaris
Phvul.007G070001 0.5kb downstream 0.5kb downstream 500 false Chr07: 6462888-6463387 Phaseolus vulgaris
Phvul.007G070001 1.0kb upstream 1.0kb upstream 1948 true Chr07: 6463388-6465335 Phaseolus vulgaris
Phvul.007G070001 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6464336-6465335 Phaseolus vulgaris
Phvul.007G070001 1.0kb downstream 1.0kb downstream 1948 true Chr07: 6462388-6464335 Phaseolus vulgaris
Phvul.007G070001 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6462388-6463387 Phaseolus vulgaris
Phvul.007G070001 2.0kb upstream 2.0kb upstream 2948 true Chr07: 6463388-6466335 Phaseolus vulgaris
Phvul.007G070001 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6464336-6466335 Phaseolus vulgaris
Phvul.007G070001 2.0kb downstream 2.0kb downstream 2948 true Chr07: 6461388-6464335 Phaseolus vulgaris
Phvul.007G070001 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6461388-6463387 Phaseolus vulgaris
Phvul.007G070001 5.0kb upstream 5.0kb upstream 5948 true Chr07: 6463388-6469335 Phaseolus vulgaris
Phvul.007G070001 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6464336-6469335 Phaseolus vulgaris
Phvul.007G070001 5.0kb downstream 5.0kb downstream 5948 true Chr07: 6458388-6464335 Phaseolus vulgaris
Phvul.007G070001 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6458388-6463387 Phaseolus vulgaris
Phvul.007G070001 10.0kb upstream 10.0kb upstream 10948 true Chr07: 6463388-6474335 Phaseolus vulgaris
Phvul.007G070001 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6464336-6474335 Phaseolus vulgaris
Phvul.007G070001 10.0kb downstream 10.0kb downstream 10948 true Chr07: 6453388-6464335 Phaseolus vulgaris
Phvul.007G070001 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6453388-6463387 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253959 5265 Fabidae View MSA
124061014 5270 Rosid View MSA
123749167 5271 Pentapetalae View MSA
122790653 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 198.461 0.0 680.61 High High
cufflinks 10.9158 0.0 46.7352    
cufflinks 7.97501 0.0 33.8293    
cufflinks 1.37967 0.0 6.45488   Low
cufflinks 1.3191 0.0 8.93194   Low
cufflinks 2.73738 0.0 15.8638    
cufflinks 5.43001 0.0 27.0057    
cufflinks 13.0091 0.0 55.9341    
cufflinks 4.26899 0.0 16.4132    
cufflinks 36.4283 0.0 127.569 High High
cufflinks 3.72451 0.0 21.2231    

0 Strain