Gene : Phvul.004G118600 P. vulgaris v2.1
Defline:  (1 of 2) K16833 - protein phosphatase inhibitor 2 (PPP1R2, IPP2) Genomic Order:  1210
Name:  ? Phvul.004G118600 Secondary Identifier:  ? PAC:37162126
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G118600 0.5kb upstream 0.5kb upstream 5338 true Chr04: 40601613-40606950 Phaseolus vulgaris
Phvul.004G118600 0.5kb upstream 0.5kb upstream 500 false Chr04: 40601613-40602112 Phaseolus vulgaris
Phvul.004G118600 0.5kb downstream 0.5kb downstream 5338 true Chr04: 40602113-40607450 Phaseolus vulgaris
Phvul.004G118600 0.5kb downstream 0.5kb downstream 500 false Chr04: 40606951-40607450 Phaseolus vulgaris
Phvul.004G118600 1.0kb upstream 1.0kb upstream 5838 true Chr04: 40601113-40606950 Phaseolus vulgaris
Phvul.004G118600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40601113-40602112 Phaseolus vulgaris
Phvul.004G118600 1.0kb downstream 1.0kb downstream 5838 true Chr04: 40602113-40607950 Phaseolus vulgaris
Phvul.004G118600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40606951-40607950 Phaseolus vulgaris
Phvul.004G118600 2.0kb upstream 2.0kb upstream 6838 true Chr04: 40600113-40606950 Phaseolus vulgaris
Phvul.004G118600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40600113-40602112 Phaseolus vulgaris
Phvul.004G118600 2.0kb downstream 2.0kb downstream 6838 true Chr04: 40602113-40608950 Phaseolus vulgaris
Phvul.004G118600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40606951-40608950 Phaseolus vulgaris
Phvul.004G118600 5.0kb upstream 5.0kb upstream 9838 true Chr04: 40597113-40606950 Phaseolus vulgaris
Phvul.004G118600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40597113-40602112 Phaseolus vulgaris
Phvul.004G118600 5.0kb downstream 5.0kb downstream 9838 true Chr04: 40602113-40611950 Phaseolus vulgaris
Phvul.004G118600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40606951-40611950 Phaseolus vulgaris
Phvul.004G118600 10.0kb upstream 10.0kb upstream 14838 true Chr04: 40592113-40606950 Phaseolus vulgaris
Phvul.004G118600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40592113-40602112 Phaseolus vulgaris
Phvul.004G118600 10.0kb downstream 10.0kb downstream 14838 true Chr04: 40602113-40616950 Phaseolus vulgaris
Phvul.004G118600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40606951-40616950 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305987 5265 Fabidae View MSA
124061983 5270 Rosid View MSA
123745681 5271 Pentapetalae View MSA
122786905 5272 Eudicot View MSA
122042878 5273 Angiosperm View MSA
121350787 5274 Embryophyte View MSA
123381884 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6383 0.0 44.9957   High
cufflinks 6.1834 0.0 28.507    
cufflinks 7.31748 0.0 31.0806    
cufflinks 7.47067 0.0 27.8872    
cufflinks 9.52033 0.0 35.5542    
cufflinks 5.10756 0.0 24.0661   Low
cufflinks 6.77641 0.0 30.1719    
cufflinks 4.68524 0.0 22.2816   Low
cufflinks 5.44681 0.0 25.4689    
cufflinks 9.89535 0.0 40.313    
cufflinks 12.1601 0.0 49.0551   High

0 Strain