Gene : Phvul.004G116500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10641:SF563 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  1188
Name:  ? Phvul.004G116500 Secondary Identifier:  ? PAC:37162105
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G116500 0.5kb upstream 0.5kb upstream 3135 true Chr04: 40056969-40060103 Phaseolus vulgaris
Phvul.004G116500 0.5kb upstream 0.5kb upstream 500 false Chr04: 40056969-40057468 Phaseolus vulgaris
Phvul.004G116500 0.5kb downstream 0.5kb downstream 3135 true Chr04: 40057469-40060603 Phaseolus vulgaris
Phvul.004G116500 0.5kb downstream 0.5kb downstream 500 false Chr04: 40060104-40060603 Phaseolus vulgaris
Phvul.004G116500 1.0kb upstream 1.0kb upstream 3635 true Chr04: 40056469-40060103 Phaseolus vulgaris
Phvul.004G116500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40056469-40057468 Phaseolus vulgaris
Phvul.004G116500 1.0kb downstream 1.0kb downstream 3635 true Chr04: 40057469-40061103 Phaseolus vulgaris
Phvul.004G116500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40060104-40061103 Phaseolus vulgaris
Phvul.004G116500 2.0kb upstream 2.0kb upstream 4635 true Chr04: 40055469-40060103 Phaseolus vulgaris
Phvul.004G116500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40055469-40057468 Phaseolus vulgaris
Phvul.004G116500 2.0kb downstream 2.0kb downstream 4635 true Chr04: 40057469-40062103 Phaseolus vulgaris
Phvul.004G116500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40060104-40062103 Phaseolus vulgaris
Phvul.004G116500 5.0kb upstream 5.0kb upstream 7635 true Chr04: 40052469-40060103 Phaseolus vulgaris
Phvul.004G116500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40052469-40057468 Phaseolus vulgaris
Phvul.004G116500 5.0kb downstream 5.0kb downstream 7635 true Chr04: 40057469-40065103 Phaseolus vulgaris
Phvul.004G116500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40060104-40065103 Phaseolus vulgaris
Phvul.004G116500 10.0kb upstream 10.0kb upstream 12635 true Chr04: 40047469-40060103 Phaseolus vulgaris
Phvul.004G116500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40047469-40057468 Phaseolus vulgaris
Phvul.004G116500 10.0kb downstream 10.0kb downstream 12635 true Chr04: 40057469-40070103 Phaseolus vulgaris
Phvul.004G116500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40060104-40070103 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309143 5265 Fabidae View MSA
124067313 5270 Rosid View MSA
123750706 5271 Pentapetalae View MSA
122786386 5272 Eudicot View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0748156 0.0 0.344368 Low  
cufflinks 0.240975 0.0 0.992574 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.145633 0.0 0.631532 Low  
cufflinks 0.272784 0.0 1.12265 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.38468 0.0 19.1958   High
cufflinks 3.73733 0.0 11.8417    
cufflinks 11.5502 0.0 32.5847   High
cufflinks 0.0197514 0.0 0.105648 Low Low
cufflinks 0.393405 0.0 1.56742 Low  

0 Strain