Gene : Phvul.007G071900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32002:SF4 - PROTEIN NLP6-RELATED Genomic Order:  725
Name:  ? Phvul.007G071900 Secondary Identifier:  ? PAC:37164767
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G071900 0.5kb upstream 0.5kb upstream 5068 true Chr07: 6724015-6729082 Phaseolus vulgaris
Phvul.007G071900 0.5kb upstream 0.5kb upstream 500 false Chr07: 6724015-6724514 Phaseolus vulgaris
Phvul.007G071900 0.5kb downstream 0.5kb downstream 5068 true Chr07: 6724515-6729582 Phaseolus vulgaris
Phvul.007G071900 0.5kb downstream 0.5kb downstream 500 false Chr07: 6729083-6729582 Phaseolus vulgaris
Phvul.007G071900 1.0kb upstream 1.0kb upstream 5568 true Chr07: 6723515-6729082 Phaseolus vulgaris
Phvul.007G071900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6723515-6724514 Phaseolus vulgaris
Phvul.007G071900 1.0kb downstream 1.0kb downstream 5568 true Chr07: 6724515-6730082 Phaseolus vulgaris
Phvul.007G071900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6729083-6730082 Phaseolus vulgaris
Phvul.007G071900 2.0kb upstream 2.0kb upstream 6568 true Chr07: 6722515-6729082 Phaseolus vulgaris
Phvul.007G071900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6722515-6724514 Phaseolus vulgaris
Phvul.007G071900 2.0kb downstream 2.0kb downstream 6568 true Chr07: 6724515-6731082 Phaseolus vulgaris
Phvul.007G071900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6729083-6731082 Phaseolus vulgaris
Phvul.007G071900 5.0kb upstream 5.0kb upstream 9568 true Chr07: 6719515-6729082 Phaseolus vulgaris
Phvul.007G071900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6719515-6724514 Phaseolus vulgaris
Phvul.007G071900 5.0kb downstream 5.0kb downstream 9568 true Chr07: 6724515-6734082 Phaseolus vulgaris
Phvul.007G071900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6729083-6734082 Phaseolus vulgaris
Phvul.007G071900 10.0kb upstream 10.0kb upstream 14568 true Chr07: 6714515-6729082 Phaseolus vulgaris
Phvul.007G071900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6714515-6724514 Phaseolus vulgaris
Phvul.007G071900 10.0kb downstream 10.0kb downstream 14568 true Chr07: 6724515-6739082 Phaseolus vulgaris
Phvul.007G071900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6729083-6739082 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040942 5273 Angiosperm View MSA
122306638 5265 Fabidae View MSA
124067661 5270 Rosid View MSA
123749691 5271 Pentapetalae View MSA
122793783 5272 Eudicot View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.31831 0.0 18.4791    
cufflinks 4.86642 0.0 17.3601    
cufflinks 34.0054 0.0 120.805   High
cufflinks 3.02634 0.0 10.3164   Low
cufflinks 10.2138 0.0 32.9384    
cufflinks 19.2423 0.0 62.538   High
cufflinks 4.97828 0.0 17.4971    
cufflinks 2.47551 0.0 8.41638   Low
cufflinks 8.21582 0.0 26.8218    
cufflinks 11.7697 0.0 37.6849    
cufflinks 4.9814 0.0 17.8438    

0 Strain