Gene : Phvul.004G123400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10584//PTHR10584:SF200 - SUGAR KINASE // SUBFAMILY NOT NAMED Genomic Order:  1261
Name:  ? Phvul.004G123400 Secondary Identifier:  ? PAC:37162931
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3801 Phaseolus vulgaris pathologic  
Pvulgaris PWY-621 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G123400 0.5kb upstream 0.5kb upstream 4217 true Chr04: 41628187-41632403 Phaseolus vulgaris
Phvul.004G123400 0.5kb upstream 0.5kb upstream 500 false Chr04: 41631904-41632403 Phaseolus vulgaris
Phvul.004G123400 0.5kb downstream 0.5kb downstream 4217 true Chr04: 41627687-41631903 Phaseolus vulgaris
Phvul.004G123400 0.5kb downstream 0.5kb downstream 500 false Chr04: 41627687-41628186 Phaseolus vulgaris
Phvul.004G123400 1.0kb upstream 1.0kb upstream 4717 true Chr04: 41628187-41632903 Phaseolus vulgaris
Phvul.004G123400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 41631904-41632903 Phaseolus vulgaris
Phvul.004G123400 1.0kb downstream 1.0kb downstream 4717 true Chr04: 41627187-41631903 Phaseolus vulgaris
Phvul.004G123400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 41627187-41628186 Phaseolus vulgaris
Phvul.004G123400 2.0kb upstream 2.0kb upstream 5717 true Chr04: 41628187-41633903 Phaseolus vulgaris
Phvul.004G123400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 41631904-41633903 Phaseolus vulgaris
Phvul.004G123400 2.0kb downstream 2.0kb downstream 5717 true Chr04: 41626187-41631903 Phaseolus vulgaris
Phvul.004G123400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 41626187-41628186 Phaseolus vulgaris
Phvul.004G123400 5.0kb upstream 5.0kb upstream 8717 true Chr04: 41628187-41636903 Phaseolus vulgaris
Phvul.004G123400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 41631904-41636903 Phaseolus vulgaris
Phvul.004G123400 5.0kb downstream 5.0kb downstream 8717 true Chr04: 41623187-41631903 Phaseolus vulgaris
Phvul.004G123400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 41623187-41628186 Phaseolus vulgaris
Phvul.004G123400 10.0kb upstream 10.0kb upstream 13717 true Chr04: 41628187-41641903 Phaseolus vulgaris
Phvul.004G123400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 41631904-41641903 Phaseolus vulgaris
Phvul.004G123400 10.0kb downstream 10.0kb downstream 13717 true Chr04: 41618187-41631903 Phaseolus vulgaris
Phvul.004G123400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 41618187-41628186 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310303 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03058 0.0 4.51539    
cufflinks 2.9605 0.0 13.725    
cufflinks 1.48011 0.0 6.09939    
cufflinks 0.837938 0.0 3.82667   Low
cufflinks 1.64456 0.0 6.79818    
cufflinks 2.26297 0.0 10.7851    
cufflinks 2.15468 0.0 10.7839    
cufflinks 7.69814 0.0 30.7072   High
cufflinks 0.647763 0.0 3.02728   Low
cufflinks 2.22485 0.0 8.20395    
cufflinks 1.70989 0.0 7.03045    

0 Strain