Gene : Phvul.007G072100 P. vulgaris v2.1
Defline:  (1 of 2) K02920 - large subunit ribosomal protein L36e (RP-L36e, RPL36) Genomic Order:  727
Name:  ? Phvul.007G072100 Secondary Identifier:  ? PAC:37166595
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G072100 0.5kb upstream 0.5kb upstream 2189 true Chr07: 6736470-6738658 Phaseolus vulgaris
Phvul.007G072100 0.5kb upstream 0.5kb upstream 500 false Chr07: 6738159-6738658 Phaseolus vulgaris
Phvul.007G072100 0.5kb downstream 0.5kb downstream 2189 true Chr07: 6735970-6738158 Phaseolus vulgaris
Phvul.007G072100 0.5kb downstream 0.5kb downstream 500 false Chr07: 6735970-6736469 Phaseolus vulgaris
Phvul.007G072100 1.0kb upstream 1.0kb upstream 2689 true Chr07: 6736470-6739158 Phaseolus vulgaris
Phvul.007G072100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6738159-6739158 Phaseolus vulgaris
Phvul.007G072100 1.0kb downstream 1.0kb downstream 2689 true Chr07: 6735470-6738158 Phaseolus vulgaris
Phvul.007G072100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6735470-6736469 Phaseolus vulgaris
Phvul.007G072100 2.0kb upstream 2.0kb upstream 3689 true Chr07: 6736470-6740158 Phaseolus vulgaris
Phvul.007G072100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6738159-6740158 Phaseolus vulgaris
Phvul.007G072100 2.0kb downstream 2.0kb downstream 3689 true Chr07: 6734470-6738158 Phaseolus vulgaris
Phvul.007G072100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6734470-6736469 Phaseolus vulgaris
Phvul.007G072100 5.0kb upstream 5.0kb upstream 6689 true Chr07: 6736470-6743158 Phaseolus vulgaris
Phvul.007G072100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6738159-6743158 Phaseolus vulgaris
Phvul.007G072100 5.0kb downstream 5.0kb downstream 6689 true Chr07: 6731470-6738158 Phaseolus vulgaris
Phvul.007G072100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6731470-6736469 Phaseolus vulgaris
Phvul.007G072100 10.0kb upstream 10.0kb upstream 11689 true Chr07: 6736470-6748158 Phaseolus vulgaris
Phvul.007G072100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6738159-6748158 Phaseolus vulgaris
Phvul.007G072100 10.0kb downstream 10.0kb downstream 11689 true Chr07: 6726470-6738158 Phaseolus vulgaris
Phvul.007G072100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6726470-6736469 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314053 5265 Fabidae View MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 173.396 0.0 466.731 High  
cufflinks 204.449 0.0 558.87 High  
cufflinks 102.144 0.0 266.128 High Low
cufflinks 232.191 0.0 641.28 High High
cufflinks 162.452 0.0 434.168 High  
cufflinks 95.6534 0.0 248.618 High Low
cufflinks 145.371 0.0 387.509 High  
cufflinks 162.219 0.0 435.439 High  
cufflinks 206.598 0.0 568.092 High  
cufflinks 77.5161 0.0 200.441 High Low
cufflinks 174.949 0.0 471.41 High  

0 Strain