Gene : Phvul.007G055200 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23500:SF70 - SUGAR TRANSPORT PROTEIN 13 Genomic Order:  551
Name:  ? Phvul.007G055200 Secondary Identifier:  ? PAC:37166808
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G055200 0.5kb upstream 0.5kb upstream 2460 true Chr07: 4575767-4578226 Phaseolus vulgaris
Phvul.007G055200 0.5kb upstream 0.5kb upstream 500 false Chr07: 4577727-4578226 Phaseolus vulgaris
Phvul.007G055200 0.5kb downstream 0.5kb downstream 2460 true Chr07: 4575267-4577726 Phaseolus vulgaris
Phvul.007G055200 0.5kb downstream 0.5kb downstream 500 false Chr07: 4575267-4575766 Phaseolus vulgaris
Phvul.007G055200 1.0kb upstream 1.0kb upstream 2960 true Chr07: 4575767-4578726 Phaseolus vulgaris
Phvul.007G055200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4577727-4578726 Phaseolus vulgaris
Phvul.007G055200 1.0kb downstream 1.0kb downstream 2960 true Chr07: 4574767-4577726 Phaseolus vulgaris
Phvul.007G055200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4574767-4575766 Phaseolus vulgaris
Phvul.007G055200 2.0kb upstream 2.0kb upstream 3960 true Chr07: 4575767-4579726 Phaseolus vulgaris
Phvul.007G055200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4577727-4579726 Phaseolus vulgaris
Phvul.007G055200 2.0kb downstream 2.0kb downstream 3960 true Chr07: 4573767-4577726 Phaseolus vulgaris
Phvul.007G055200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4573767-4575766 Phaseolus vulgaris
Phvul.007G055200 5.0kb upstream 5.0kb upstream 6960 true Chr07: 4575767-4582726 Phaseolus vulgaris
Phvul.007G055200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4577727-4582726 Phaseolus vulgaris
Phvul.007G055200 5.0kb downstream 5.0kb downstream 6960 true Chr07: 4570767-4577726 Phaseolus vulgaris
Phvul.007G055200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4570767-4575766 Phaseolus vulgaris
Phvul.007G055200 10.0kb upstream 10.0kb upstream 11960 true Chr07: 4575767-4587726 Phaseolus vulgaris
Phvul.007G055200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4577727-4587726 Phaseolus vulgaris
Phvul.007G055200 10.0kb downstream 10.0kb downstream 11960 true Chr07: 4565767-4577726 Phaseolus vulgaris
Phvul.007G055200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4565767-4575766 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316409 5265 Fabidae View MSA
124040581 5270 Rosid View MSA
123747169 5271 Pentapetalae View MSA
122795547 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.872193 0.0 3.0753    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.221057 0.0 0.879956 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain