Gene : Phvul.004G106700 P. vulgaris v2.1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  1088
Name:  ? Phvul.004G106700 Secondary Identifier:  ? PAC:37163415
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G106700 0.5kb upstream 0.5kb upstream 1633 true Chr04: 35318203-35319835 Phaseolus vulgaris
Phvul.004G106700 0.5kb upstream 0.5kb upstream 500 false Chr04: 35318203-35318702 Phaseolus vulgaris
Phvul.004G106700 0.5kb downstream 0.5kb downstream 1633 true Chr04: 35318703-35320335 Phaseolus vulgaris
Phvul.004G106700 0.5kb downstream 0.5kb downstream 500 false Chr04: 35319836-35320335 Phaseolus vulgaris
Phvul.004G106700 1.0kb upstream 1.0kb upstream 2133 true Chr04: 35317703-35319835 Phaseolus vulgaris
Phvul.004G106700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35317703-35318702 Phaseolus vulgaris
Phvul.004G106700 1.0kb downstream 1.0kb downstream 2133 true Chr04: 35318703-35320835 Phaseolus vulgaris
Phvul.004G106700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35319836-35320835 Phaseolus vulgaris
Phvul.004G106700 2.0kb upstream 2.0kb upstream 3133 true Chr04: 35316703-35319835 Phaseolus vulgaris
Phvul.004G106700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35316703-35318702 Phaseolus vulgaris
Phvul.004G106700 2.0kb downstream 2.0kb downstream 3133 true Chr04: 35318703-35321835 Phaseolus vulgaris
Phvul.004G106700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35319836-35321835 Phaseolus vulgaris
Phvul.004G106700 5.0kb upstream 5.0kb upstream 6133 true Chr04: 35313703-35319835 Phaseolus vulgaris
Phvul.004G106700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35313703-35318702 Phaseolus vulgaris
Phvul.004G106700 5.0kb downstream 5.0kb downstream 6133 true Chr04: 35318703-35324835 Phaseolus vulgaris
Phvul.004G106700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35319836-35324835 Phaseolus vulgaris
Phvul.004G106700 10.0kb upstream 10.0kb upstream 11133 true Chr04: 35308703-35319835 Phaseolus vulgaris
Phvul.004G106700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35308703-35318702 Phaseolus vulgaris
Phvul.004G106700 10.0kb downstream 10.0kb downstream 11133 true Chr04: 35318703-35329835 Phaseolus vulgaris
Phvul.004G106700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35319836-35329835 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308704 5265 Fabidae View MSA
124067243 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7963 0.0 70.4085    
cufflinks 14.9364 0.0 41.1387    
cufflinks 286.605 0.0 846.115 High High
cufflinks 16.031 0.0 44.1854    
cufflinks 15.7759 0.0 43.6475    
cufflinks 69.9706 0.0 181.777 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.277422 0.0 1.13356 Low Low
cufflinks 20.5023 0.0 55.0336    
cufflinks 7.35332 0.0 21.929    

0 Strain