Gene : Phvul.007G057400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF11 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Genomic Order:  574
Name:  ? Phvul.007G057400 Secondary Identifier:  ? PAC:37165508
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G057400 0.5kb upstream 0.5kb upstream 11360 true Chr07: 4823012-4834371 Phaseolus vulgaris
Phvul.007G057400 0.5kb upstream 0.5kb upstream 500 false Chr07: 4823012-4823511 Phaseolus vulgaris
Phvul.007G057400 0.5kb downstream 0.5kb downstream 11360 true Chr07: 4823512-4834871 Phaseolus vulgaris
Phvul.007G057400 0.5kb downstream 0.5kb downstream 500 false Chr07: 4834372-4834871 Phaseolus vulgaris
Phvul.007G057400 1.0kb upstream 1.0kb upstream 11860 true Chr07: 4822512-4834371 Phaseolus vulgaris
Phvul.007G057400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4822512-4823511 Phaseolus vulgaris
Phvul.007G057400 1.0kb downstream 1.0kb downstream 11860 true Chr07: 4823512-4835371 Phaseolus vulgaris
Phvul.007G057400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4834372-4835371 Phaseolus vulgaris
Phvul.007G057400 2.0kb upstream 2.0kb upstream 12860 true Chr07: 4821512-4834371 Phaseolus vulgaris
Phvul.007G057400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4821512-4823511 Phaseolus vulgaris
Phvul.007G057400 2.0kb downstream 2.0kb downstream 12860 true Chr07: 4823512-4836371 Phaseolus vulgaris
Phvul.007G057400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4834372-4836371 Phaseolus vulgaris
Phvul.007G057400 5.0kb upstream 5.0kb upstream 15860 true Chr07: 4818512-4834371 Phaseolus vulgaris
Phvul.007G057400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4818512-4823511 Phaseolus vulgaris
Phvul.007G057400 5.0kb downstream 5.0kb downstream 15860 true Chr07: 4823512-4839371 Phaseolus vulgaris
Phvul.007G057400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4834372-4839371 Phaseolus vulgaris
Phvul.007G057400 10.0kb upstream 10.0kb upstream 20860 true Chr07: 4813512-4834371 Phaseolus vulgaris
Phvul.007G057400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4813512-4823511 Phaseolus vulgaris
Phvul.007G057400 10.0kb downstream 10.0kb downstream 20860 true Chr07: 4823512-4844371 Phaseolus vulgaris
Phvul.007G057400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4834372-4844371 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303515 5265 Fabidae View MSA
124063905 5270 Rosid View MSA
123737259 5271 Pentapetalae View MSA
122789928 5272 Eudicot View MSA
122042202 5273 Angiosperm View MSA
121309933 5274 Embryophyte View MSA
123347562 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.16446 0.0 24.3439   Low
cufflinks 20.5893 0.0 53.2206   High
cufflinks 8.55076 0.0 22.9156   Low
cufflinks 10.7287 0.0 28.2477    
cufflinks 14.7767 0.0 38.323    
cufflinks 16.3722 0.0 42.4188    
cufflinks 14.0557 0.0 36.5008    
cufflinks 12.3704 0.0 32.3187    
cufflinks 16.7354 0.0 43.3233    
cufflinks 26.5772 0.0 68.8673   High
cufflinks 17.1935 0.0 44.4993    

0 Strain