Gene : Phvul.007G057800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33057:SF21 - OVATE FAMILY PROTEIN 11-RELATED Genomic Order:  578
Name:  ? Phvul.007G057800 Secondary Identifier:  ? PAC:37165463
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G057800 0.5kb upstream 0.5kb upstream 2295 true Chr07: 4866360-4868654 Phaseolus vulgaris
Phvul.007G057800 0.5kb upstream 0.5kb upstream 500 false Chr07: 4868155-4868654 Phaseolus vulgaris
Phvul.007G057800 0.5kb downstream 0.5kb downstream 2295 true Chr07: 4865860-4868154 Phaseolus vulgaris
Phvul.007G057800 0.5kb downstream 0.5kb downstream 500 false Chr07: 4865860-4866359 Phaseolus vulgaris
Phvul.007G057800 1.0kb upstream 1.0kb upstream 2795 true Chr07: 4866360-4869154 Phaseolus vulgaris
Phvul.007G057800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4868155-4869154 Phaseolus vulgaris
Phvul.007G057800 1.0kb downstream 1.0kb downstream 2795 true Chr07: 4865360-4868154 Phaseolus vulgaris
Phvul.007G057800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4865360-4866359 Phaseolus vulgaris
Phvul.007G057800 2.0kb upstream 2.0kb upstream 3795 true Chr07: 4866360-4870154 Phaseolus vulgaris
Phvul.007G057800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4868155-4870154 Phaseolus vulgaris
Phvul.007G057800 2.0kb downstream 2.0kb downstream 3795 true Chr07: 4864360-4868154 Phaseolus vulgaris
Phvul.007G057800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4864360-4866359 Phaseolus vulgaris
Phvul.007G057800 5.0kb upstream 5.0kb upstream 6795 true Chr07: 4866360-4873154 Phaseolus vulgaris
Phvul.007G057800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4868155-4873154 Phaseolus vulgaris
Phvul.007G057800 5.0kb downstream 5.0kb downstream 6795 true Chr07: 4861360-4868154 Phaseolus vulgaris
Phvul.007G057800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4861360-4866359 Phaseolus vulgaris
Phvul.007G057800 10.0kb upstream 10.0kb upstream 11795 true Chr07: 4866360-4878154 Phaseolus vulgaris
Phvul.007G057800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4868155-4878154 Phaseolus vulgaris
Phvul.007G057800 10.0kb downstream 10.0kb downstream 11795 true Chr07: 4856360-4868154 Phaseolus vulgaris
Phvul.007G057800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4856360-4866359 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310845 5265 Fabidae View MSA
124065353 5270 Rosid View MSA
123736628 5271 Pentapetalae View MSA
122795583 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.780104 0.0 2.7727    
cufflinks 8.20526 0.0 22.6362   High
cufflinks 0.596583 0.0 2.17621    
cufflinks 0.41617 0.0 1.56827 Low  
cufflinks 2.34173 0.0 7.38013    
cufflinks 0.233455 0.0 0.91902 Low Low
cufflinks 1.7939 0.0 5.80354    
cufflinks 0.853311 0.0 2.99726    
cufflinks 2.05467 0.0 6.57282    
cufflinks 0.160564 0.0 0.652052 Low Low
cufflinks 3.35792 0.0 10.1743    

0 Strain