Gene : Phvul.004G109000 P. vulgaris v2.1
Genomic Order:  1118 Name:  ? Phvul.004G109000
Secondary Identifier:  ? PAC:37163848
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G109000 0.5kb upstream 0.5kb upstream 3118 true Chr04: 37891398-37894515 Phaseolus vulgaris
Phvul.004G109000 0.5kb upstream 0.5kb upstream 500 false Chr04: 37891398-37891897 Phaseolus vulgaris
Phvul.004G109000 0.5kb downstream 0.5kb downstream 3118 true Chr04: 37891898-37895015 Phaseolus vulgaris
Phvul.004G109000 0.5kb downstream 0.5kb downstream 500 false Chr04: 37894516-37895015 Phaseolus vulgaris
Phvul.004G109000 1.0kb upstream 1.0kb upstream 3618 true Chr04: 37890898-37894515 Phaseolus vulgaris
Phvul.004G109000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 37890898-37891897 Phaseolus vulgaris
Phvul.004G109000 1.0kb downstream 1.0kb downstream 3618 true Chr04: 37891898-37895515 Phaseolus vulgaris
Phvul.004G109000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 37894516-37895515 Phaseolus vulgaris
Phvul.004G109000 2.0kb upstream 2.0kb upstream 4618 true Chr04: 37889898-37894515 Phaseolus vulgaris
Phvul.004G109000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 37889898-37891897 Phaseolus vulgaris
Phvul.004G109000 2.0kb downstream 2.0kb downstream 4618 true Chr04: 37891898-37896515 Phaseolus vulgaris
Phvul.004G109000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 37894516-37896515 Phaseolus vulgaris
Phvul.004G109000 5.0kb upstream 5.0kb upstream 7618 true Chr04: 37886898-37894515 Phaseolus vulgaris
Phvul.004G109000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 37886898-37891897 Phaseolus vulgaris
Phvul.004G109000 5.0kb downstream 5.0kb downstream 7618 true Chr04: 37891898-37899515 Phaseolus vulgaris
Phvul.004G109000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 37894516-37899515 Phaseolus vulgaris
Phvul.004G109000 10.0kb upstream 10.0kb upstream 12618 true Chr04: 37881898-37894515 Phaseolus vulgaris
Phvul.004G109000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 37881898-37891897 Phaseolus vulgaris
Phvul.004G109000 10.0kb downstream 10.0kb downstream 12618 true Chr04: 37891898-37904515 Phaseolus vulgaris
Phvul.004G109000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 37894516-37904515 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313514 5265 Fabidae View MSA
124064876 5270 Rosid View MSA
123742190 5271 Pentapetalae View MSA
122791015 5272 Eudicot View MSA
122047689 5273 Angiosperm View MSA
121310779 5274 Embryophyte View MSA
123348183 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.9072 0.0 124.935   High
cufflinks 28.4731 0.0 111.384    
cufflinks 22.5758 0.0 90.1697    
cufflinks 30.0698 0.0 107.122    
cufflinks 22.8092 0.0 91.3915    
cufflinks 23.2331 0.0 91.981    
cufflinks 16.1154 0.0 67.1915   Low
cufflinks 16.6769 0.0 68.0842   Low
cufflinks 15.6691 0.0 52.8342   Low
cufflinks 33.6115 0.0 131.956   High
cufflinks 31.6411 0.0 114.805    

0 Strain